Pairwise Alignments

Query, 235 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 272 a.a., formylmethanofuran dehydrogenase subunit C from Methanococcus maripaludis S2

 Score = 56.2 bits (134), Expect = 6e-13
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 7/100 (7%)

Query: 86  VAENMMSGFVHVRGDASQSAGATAHGGMLVVDGNASARCGISMKGVDIVVKGSIGHM--S 143
           + E M SG + V GDA    G    GG + V+G+A +  G ++KG +I++ G+  +   S
Sbjct: 76  IGEKMTSGEIVVNGDAGMYIGVEMKGGKITVNGDAESWVGQNLKGGEIIINGNAENYVGS 135

Query: 144 AFMG-----QSGSLVVLGDAGEALGDSLYEAKLFVRGTVK 178
           A+ G       G + + G+AG  LG+ L    + ++G  K
Sbjct: 136 AYRGDWRGMSGGKITITGNAGSELGEYLKGGTIVIKGNTK 175



 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 7/128 (5%)

Query: 57  VEIEGNVGYYCAGMNAEASVIIHGNAGQGVAENMMSGFVHVRGDASQSAGATAHG----- 111
           + + G+ G Y         + ++G+A   V +N+  G + + G+A    G+   G     
Sbjct: 85  IVVNGDAGMYIGVEMKGGKITVNGDAESWVGQNLKGGEIIINGNAENYVGSAYRGDWRGM 144

Query: 112 --GMLVVDGNASARCGISMKGVDIVVKGSIGHMSAFMGQSGSLVVLGDAGEALGDSLYEA 169
             G + + GNA +  G  +KG  IV+KG+   M       G +++ GD     G  + + 
Sbjct: 145 SGGKITITGNAGSELGEYLKGGTIVIKGNTKIMPGIHQNGGMIIIEGDIEGRAGGEMMKG 204

Query: 170 KLFVRGTV 177
            + V G +
Sbjct: 205 AIVVYGKI 212



 Score = 43.9 bits (102), Expect = 3e-09
 Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 8/135 (5%)

Query: 42  NGRHAVAVGLAMPL-TVEIEGNVGYYCAGMNAEASVIIHGNAGQGVAE-------NMMSG 93
           NG   + +G+ M    + + G+   +         +II+GNA   V          M  G
Sbjct: 88  NGDAGMYIGVEMKGGKITVNGDAESWVGQNLKGGEIIINGNAENYVGSAYRGDWRGMSGG 147

Query: 94  FVHVRGDASQSAGATAHGGMLVVDGNASARCGISMKGVDIVVKGSIGHMSAFMGQSGSLV 153
            + + G+A    G    GG +V+ GN     GI   G  I+++G I   +      G++V
Sbjct: 148 KITITGNAGSELGEYLKGGTIVIKGNTKIMPGIHQNGGMIIIEGDIEGRAGGEMMKGAIV 207

Query: 154 VLGDAGEALGDSLYE 168
           V G   E L    +E
Sbjct: 208 VYGKILEPLPSFKFE 222



 Score = 31.2 bits (69), Expect = 2e-05
 Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 5/98 (5%)

Query: 123 RCGISMKGVDIVVKGSIGHMSAFMGQSGSLVVLGDAGEALGDSLYEAKLFVRGTVKSLGA 182
           R G  M   +IVV G  G       + G + V GDA   +G +L   ++ + G  ++   
Sbjct: 75  RIGEKMTSGEIVVNGDAGMYIGVEMKGGKITVNGDAESWVGQNLKGGEIIINGNAENY-- 132

Query: 183 DCIEKEMRDEHKALLAQKLKAAGLEGAVDVSEFKRYGS 220
             +    R + + +   K+   G  G+ ++ E+ + G+
Sbjct: 133 --VGSAYRGDWRGMSGGKITITGNAGS-ELGEYLKGGT 167