Pairwise Alignments

Query, 445 a.a., Isopentenyl-diphosphate delta-isomerase from Xanthobacter sp. DMC5

Subject, 494 a.a., rubredoxin from Methanococcus maripaludis S2

 Score =  223 bits (568), Expect = 1e-62
 Identities = 135/393 (34%), Positives = 213/393 (54%), Gaps = 20/393 (5%)

Query: 25  EIRRAAATGIYDIRGGGTKRKLPHFDDLLFLGASMSRYPLEGYREKCGTEVTLGTRFAKK 84
           +I + + TG   I    TK+ +  ++ +   GA ++++PL    E   T+  +G + AK 
Sbjct: 106 DIHKISVTGESIIEPMRTKKPVISWESIFIKGAQLAKFPLNNDEEVI-TKTIIGPK-AKH 163

Query: 85  PITLKTPVTIAGMSFGALSAQAKEALGRGASTVGTSTTTGDGGMTPEERGQSKTLVYQYL 144
           P+ ++TP+ I  MS+GALS   K AL +G++ V T+  +G+GGM  E    +   + +Y+
Sbjct: 164 PLIIETPIFITHMSYGALSKNVKIALSKGSAAVKTAMCSGEGGMLEESFENAYKYILEYV 223

Query: 145 PSRYGMNPVDLRKADAIEIVIGQGAKPGGGGMLLGQKISDRVAAMRTLPKGIDQRSACRH 204
           P++Y +   +L+K DA+EI IGQ +KPG GG L  +K+S+ +A +R    G D  S  + 
Sbjct: 224 PNQYSITDENLKKVDAVEIKIGQSSKPGMGGHLPAEKVSEEIAKLRGFKVGQDIVSPSKF 283

Query: 205 PDWTGPDDLEIKIEELREITDWEKPIYVKVGASRPYYDTALAVKAGADVVVLDGMQGGTA 264
            D    DDL+ K+  LRE     KPI +K+ A     D  +A  A  D + +DG  G TA
Sbjct: 284 HDINNKDDLKNKVSNLRE-KSGGKPIGIKIAAGDIEADLEVATYAKPDFITIDGRPGATA 342

Query: 265 ATQDVFIEHVGIPILAAIRPAVQALQDLDMHRKVQLIVSGGIRTGADVAKALALGADAVA 324
           A+     +   +P + A+  A +      +   + L+++GG+R  +D AKA+A+GADA+A
Sbjct: 343 ASPKFIKDSTSVPTIFALYRAREFFNKNGI-TDISLVITGGLRISSDFAKAIAIGADAIA 401

Query: 325 IGTAALVALGDNDPQWEDEYQALGSTAGAYDDWHEGRDPAGITTQDPELSKRLDPVKAGR 384
           IGTAAL+A                +    Y     G  P G+TTQ PEL  RL    + +
Sbjct: 402 IGTAALMA----------------TACQQYRICDTGECPVGVTTQKPELKDRLKIELSAK 445

Query: 385 RLANYLSVMTLEAQTIARACGKSHLHNLEPEDL 417
           +L+NYL V T E +T AR  G  ++H+L  +DL
Sbjct: 446 KLSNYLRVSTEELKTFARLTGNKNIHDLSVDDL 478