Pairwise Alignments

Query, 445 a.a., Isopentenyl-diphosphate delta-isomerase from Xanthobacter sp. DMC5

Subject, 496 a.a., glutamate synthase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  138 bits (348), Expect = 3e-37
 Identities = 110/358 (30%), Positives = 168/358 (46%), Gaps = 35/358 (9%)

Query: 75  VTLGTRFAKKPITLKTPVTIAGMSFGALSAQAKEALGRGASTVGTSTTTGDGGMTPEERG 134
           +T+G    + P T      I+ MSFGALS  A  AL  GA+  G    TG+GG++P    
Sbjct: 132 LTIGPH-CRVPYTTSAICHISAMSFGALSRPAVTALSHGAAQAGCWLNTGEGGLSPYHLK 190

Query: 135 QSKTLVYQYLPSRYGMNP----VDLRKADAI---------EIVIGQGAKPGGGGMLLGQK 181
               LV+Q   ++YG+      +D  K  AI         EI + QGAKPG GG+L G K
Sbjct: 191 GGCDLVFQIGTAKYGVRNEHGHLDDDKLTAIAAHPEVKMFEIKMSQGAKPGKGGILPGVK 250

Query: 182 ISDRVAAMRTLPKGIDQRSACRHPDWTGPDDLEIKIEELREITDWEKPIYVKVGASRPYY 241
           +++ +A +R +P G D  S   H ++    D+   I  +RE+T     I   +G  +   
Sbjct: 251 VTEEIAHIRGIPLGQDSISPNGHIEFNNVGDILDMIARVREVTGKPTGIKAVLGDVQWLE 310

Query: 242 DTALAVK-----AGADVVVLDGMQGGTAATQDVFIEHVGIPILAAIRPAVQALQDLDMHR 296
           D    ++     +  D   LD   GGT A     +++VG+P+  ++   V  L    + +
Sbjct: 311 DFCNEIERRGEASAPDFFTLDSADGGTGAAPQPLMDYVGLPLKESLPILVNILIKHGLGK 370

Query: 297 KVQLIVSGGIRTGADVAKALALGADAVAIGTAALVALGDNDPQWEDEYQALGSTAGAYDD 356
           ++++I SG +   + VA ALALGAD +A     + ALG          QAL         
Sbjct: 371 RIKVIASGKLIVPSRVAWALALGADFIASARGNMFALGC--------IQAL--------Q 414

Query: 357 WHEGRDPAGITTQDPELSKRLDPVKAGRRLANYLSVMTLEAQTIARACGKSHLHNLEP 414
            ++   P GITT + +L   LDP     R+ANY   +  +   IA +CG +    L+P
Sbjct: 415 CNKDTCPTGITTHNKKLQHGLDPRDKSTRVANYNHNLHHDLALIAHSCGLTEPRQLKP 472