Pairwise Alignments

Query, 355 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 71.6 bits (174), Expect = 3e-17
 Identities = 68/291 (23%), Positives = 126/291 (43%), Gaps = 19/291 (6%)

Query: 38  DKTLVVSNWGGDWNERTIKFVEAPLVESQGIKIVRDLGMEPERKAKLIAEKRLRRGT-ID 96
           ++TL V  WGG   E+++K  E    + +G+ I        E    +  + +L +GT  D
Sbjct: 22  EQTLNVYAWGGYLPEKSLKAFE----QQEGVTINYSTF---ENNESMYTKLKLLKGTGYD 74

Query: 97  VIHINEGDSVELYAQEVIDNIDFSKVPNYADVVPAL------KSKPFFVPWLYSGVTIIY 150
           V+  +     ++  + ++  ID +++PN  D +P +          F +P+++    + Y
Sbjct: 75  VVFASAYFIEKMGREGLLAEIDHNQIPNMKDAMPTVLGLAHDPQNKFSLPYIWGITGLYY 134

Query: 151 NKDKVPNPPKSYAELWDKKWAGKIGLTNQLYFNYIMMAGLIKGG--NVTNTEEGKARLIE 208
           N   +PN    +A+LWDK++  ++ L + +  +   MA  + G   N  N EE K     
Sbjct: 135 NSSTLPNGITKWADLWDKQYEQQVMLIDDIR-DVFGMALKLNGFSINTKNEEEIKKAYES 193

Query: 209 LKELTQPRIYAAHQQLGAGLVNGEVDIAVNYKARGLQWANDGAPLAIGYPSEGAIAVMFG 268
           L  L +  +           V+GE  + + +     Q   +   L    P EGA+  M  
Sbjct: 194 LVALKKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDN 253

Query: 269 AALPKKAPSPDLSLIYFNAMLDPKAMAGLAGASFYAPA--NSKAELSPELK 317
             +P  + +  L+  + N M  P+  A +  +  YA A    +A L  EL+
Sbjct: 254 FTIPSGSKNIPLAHKFINFMYQPENQAEIVQSLGYASATKGGRALLPAELR 304