Pairwise Alignments

Query, 355 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 63.5 bits (153), Expect = 8e-15
 Identities = 62/281 (22%), Positives = 121/281 (43%), Gaps = 19/281 (6%)

Query: 22  GAGAAAVSLPGLARAQDKTLVVSNWGGDWNERTIKFVEAPLVESQGIKIVRDLGMEPERK 81
           G+  A   L G A A+DK LV  NWG   N   ++       +  GIK++       E  
Sbjct: 10  GSACALSLLSGTAAAEDKELVFMNWGPYINSGILE----QFTKETGIKVIYSTY---ESN 62

Query: 82  AKLIAEKRLRRGTIDVIHINEGDSVELYAQEVIDNIDFSKVPNYADVVPALKSKPF---- 137
             L A+ +      D++  +     ++  + ++  ID SK+ N+ ++      KP+    
Sbjct: 63  ETLYAKLKTHNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDKPYDPNN 122

Query: 138 --FVPWLYSGVTIIYNKDKV-PNPPKSYAELWDKKWAGKIGL---TNQLYFNYIMMAGLI 191
              +P + +   +  N D   PN  +S+ +LW  +  G++ L   T +++  +I +  L 
Sbjct: 123 DYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTREVF--HIALRKLG 180

Query: 192 KGGNVTNTEEGKARLIELKELTQPRIYAAHQQLGAGLVNGEVDIAVNYKARGLQWANDGA 251
             GN T+ ++      EL++L    +        A  ++GEV + + +         +G 
Sbjct: 181 YSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGL 240

Query: 252 PLAIGYPSEGAIAVMFGAALPKKAPSPDLSLIYFNAMLDPK 292
           P+ + +P EG I  +   A+   A + D +    + +L P+
Sbjct: 241 PIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPE 281