Pairwise Alignments

Query, 355 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 18/292 (6%)

Query: 34  ARAQDKTLVVSNWGGDWNERTIKFVEAPLVESQGIKIVRDLGMEPERKAKLIAEKRLRRG 93
           A A+D+ L   NW    +E     V     +  GIK++       E    + A+ + +  
Sbjct: 20  AMAKDQELYFYNW----SEYIPSEVLEDFTKETGIKVIYSTY---ESNESMYAKLKTQGA 72

Query: 94  TIDVIHINEGDSVELYAQEVIDNIDFSKVPNYADVVPALKSKPF------FVPWLYSGVT 147
             D++  +     ++  + ++  ID SK+ ++ D+ P   +KPF       +P+++    
Sbjct: 73  GYDLVVPSTYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNKPFDPGNKFSIPYIWGATG 132

Query: 148 IIYNKDKVPNPP-KSYAELWDKKWAGKIGLTNQLY-FNYIMMAGLIKGGNVTNTEEGKAR 205
           I  N D +     K++ +LWD KWAG++ L +      +I ++ L    N TN +E KA 
Sbjct: 133 IGINTDMLDKKSLKNWGDLWDAKWAGQLMLMDDAREVFHIALSKLGYSPNTTNPKEIKAA 192

Query: 206 LIELKELTQPRIYAAHQQLGAG-LVNGEVDIAVNYKARGLQWANDGAPLAIGYPSEGAIA 264
             ELK+L  P +   +    A   + GEV + + +         +GAP+ I +P +G I 
Sbjct: 193 YRELKKL-MPNVLVFNSDFPANPYLAGEVSLGMLWNGSAYMARQEGAPIQIIWPEKGTIF 251

Query: 265 VMFGAALPKKAPSPDLSLIYFNAMLDPKAMAGLA-GASFYAPANSKAELSPE 315
            M   ++P  A + + +    + +L P+  A +A    +  P  +  +L P+
Sbjct: 252 WMDSISIPAGAKNIEAAHKMIDFLLRPENAAKIALEIGYPTPVKTAHDLLPK 303