Pairwise Alignments

Query, 308 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

 Score =  160 bits (405), Expect = 3e-44
 Identities = 86/237 (36%), Positives = 142/237 (59%), Gaps = 7/237 (2%)

Query: 71  ALTLDNYARFFADSFYQEVLGTTLWISALSTLLCLVAGFPVAYFLVRQASDKWKGRLLLL 130
           A T +NY R   D  Y +V+  + +++ ++TL+CLV G+P AY +V +  +KW+  +L L
Sbjct: 48  AFTFENYTRLL-DPLYGKVMLHSFYMAIVATLICLVIGYPFAY-IVAKMPEKWRPFMLFL 105

Query: 131 IVLPLLMGNAVRTAAWMVILGDKGLFNAVIGAIGI--TPVKLMYTPTAVVIGLVSVLLPF 188
           I++P    + +RT    ++LG +G+ N  + ++G+   P+++M+T TAV+IGLV +LLPF
Sbjct: 106 IIVPFWTNSLIRTYGLKIVLGTQGILNQALMSLGLIDAPLRIMFTETAVMIGLVYILLPF 165

Query: 189 MIVTLQSVIEGIDANLESAAQSLGASHLTVLRRVVLPLALPGILAGTMLCFILSMNAYAT 248
           MI+ L S IE +D     AA+ LGA+    L RV+LPL +PGI+ G +L  + ++  +  
Sbjct: 166 MILPLYSAIEKLDGTYIEAARDLGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYI 225

Query: 249 PVLIGGPSFHMMAPTVYQQVAKAMNWPFGAALAFVL---MAVTLVLTTTANVLVQRR 302
             L+GG    ++   +  QV  A +WPFGAA +  L   MA+ L     A  L+ ++
Sbjct: 226 ADLLGGAKNLLIGNVIKSQVLNARDWPFGAATSIALTLAMAIMLYAYYRAGKLLNKK 282