Pairwise Alignments

Query, 493 a.a., Porin B from Xanthobacter sp. DMC5

Subject, 442 a.a., Glucose-selective porin OprB from Pseudomonas fluorescens FW300-N2E2

 Score =  129 bits (324), Expect = 2e-34
 Identities = 116/449 (25%), Positives = 191/449 (42%), Gaps = 55/449 (12%)

Query: 61  AEEEAEPSIAPQLGW-LGDWGGYRPKLAEAGIKVGVNYIGELWRNTEGGLGTGTA--YNG 117
           A   A+ + +P+  W LGDWGG R +L E G    V Y G+   N  GG  + T   Y  
Sbjct: 23  ANSHAQEAFSPESPWMLGDWGGLRTELLEKGYTFNVLYTGDAATNLAGGYDSHTTARYTD 82

Query: 118 RFQFSLDADLDKLFNWKGATFHASVLQIQGSGFSGQYLGN--IMGVSNVDAL----STTR 171
           +     + DL+K+  W+ A F  ++    G   +   L +  + G+S V  +     T R
Sbjct: 83  QLALMSNFDLEKILGWEDADFQFTISDRNGRNLTNDVLTDPRVGGISQVQEVYGRGQTWR 142

Query: 172 LFELYIEQAFGDGKSSIRFGQLSADSEFAISDNGSL---FLNSTF--GWPALFAADLPSG 226
           L +L+  Q F DG   I+ G+++   +F     GS    F N  F    P  +A D+   
Sbjct: 143 LTQLWYRQKFFDGGLDIKLGRMNFGEDF-----GSFPCKFQNLAFCGAQPGNWAGDIIYN 197

Query: 227 GPAYPLATPGVRVKWVPNDEWTVLVGLFNGNPAPCCGDPQEENKYGLNFIVDQGVFVIGE 286
              +P+     RVK   +D     +G +  NP+      +  N + L+   ++G  V  E
Sbjct: 198 ---WPITQWAGRVKVALSDNTYAQIGAYEQNPSYL----EIGNGFKLSGSGNEGTLVPVE 250

Query: 287 VAYSYNKAENAAWLPGTVKVGGWYNSNSFNSQVYDIFGVPLASPASIGLPNQIQGDYAFY 346
           + ++   +  A  LPG  +VG +Y+S   N            +    G+       +  +
Sbjct: 251 LVHT--TSLGAGRLPGEYRVGAYYSSRDAND----------VNTEENGIAKSRDSKHGAW 298

Query: 347 AIIDQMIWRKPGTKDKGISVFGRVTAAPSEQNQLGFYWDGGITFKGLVPGREDDAFGVAF 406
               Q +W+ P    +G++VF   T      N +  Y   G  +      R +D  GVA 
Sbjct: 299 IAGQQQVWKDPDFAARGLTVFAYATVHDKATNMIDRYAQVGAYYTAPFKSRPNDEIGVAI 358

Query: 407 G----NARVTNAAQQADLYTALY---NGSYYPIRSSETVLEVTYSAQVMPGWTIQPDFQY 459
                N R T+  QQ +    +    +  Y P +SSET +E+ Y   V    T++P+ Q+
Sbjct: 359 ASLHVNNRFTDHQQQLNDRAGVSDYDDPRYTPTQSSETNMEIYYGFGVTKWLTVRPNLQF 418

Query: 460 IWNPGGGVLNPNDPLGISLVKNAAVFGVR 488
           + NPG          G+S V++A V G++
Sbjct: 419 VGNPG----------GVSEVRDAWVAGLK 437