Pairwise Alignments

Query, 390 a.a., Inner membrane transport protein YdhP from Xanthobacter sp. DMC5

Subject, 397 a.a., efflux protein from Sinorhizobium meliloti 1021

 Score =  269 bits (688), Expect = 9e-77
 Identities = 158/395 (40%), Positives = 228/395 (57%), Gaps = 9/395 (2%)

Query: 5   LPLVALAIGAFGIGVTEFSPMGMLPIIASDLGVSIPAAGLLVSAYAFGVLVTAPIMTLSF 64
           L + AL I A+ IG TEF  +G+LP +A+DL +++P AGL+VS YA GV   AP++T   
Sbjct: 3   LAIFALTIAAYAIGTTEFVIVGLLPTVATDLAITLPLAGLIVSVYALGVTFGAPVLTALT 62

Query: 65  ASMPRRRLLVLSMGIFTIGNLISAFADGYWMLLAGRIVTSFNHGAFFGVGAVVAASVVPA 124
             + R+ LL+  M +F  GN  +A +  Y +LL  R++++F HG FF VG+ +AA +VP 
Sbjct: 63  GRIERKPLLLGLMALFIGGNTAAALSPNYEVLLVARVLSAFAHGVFFSVGSTIAADLVPE 122

Query: 125 DKRAGAVAAMFSGLTIATIGGVPLAAWVGEAVGWRMAFFGIAVIGAIAMVAVRLSLP-PL 183
           ++RA A+A MF GLT+A + GVP+  ++G+  GWR  F+G++ +G +A   +   LP  L
Sbjct: 123 NRRASAIAMMFMGLTVAIVTGVPIGTYIGQVFGWRATFWGVSGLGVVAFAGIATLLPGTL 182

Query: 184 EVQGESDMRAELKVLMRGPVLAALLLTVVSSSAMFTVFTYIAPILQVETGAVSGFVTAML 243
                + +  +++VL  G +L    +T +     F  FT++APILQ  TG     V+ +L
Sbjct: 183 AKAAPASLLDQVRVLGSGRLLIVFAMTALGYGGTFVAFTFLAPILQEVTGFSERSVSLIL 242

Query: 244 VVYGLGLALGNWLGGRFADRSLDGTLIGSLTAVAVLLVLFVPGMHSHLATVPLVFLWGIA 303
           V+YG+ +A+GN  GGR A+ +    LIG     A++LV+F     S + T+  +   G  
Sbjct: 243 VLYGVAIAIGNIAGGRIANTNPVKALIGLFLLQALVLVIFSFTAVSPVLTLVTLAALGFL 302

Query: 304 SFALVPPLQMRVVHEASE----APHLASAMNIGAFNLGNALGAALGGAVIDAGLGYPAVS 359
           SFA VP LQ+ VV  A E    A  +ASA+NI AFNLG ALGA LGG V+D+  G  A  
Sbjct: 303 SFANVPGLQLYVVQLAMEHRPGAVDVASALNIAAFNLGIALGAWLGGMVVDSPFGLSATP 362

Query: 360 LAGAGTALAGLAFTL----LLRRGRRGLEAAPAQG 390
             GA      L  TL    L RRG    E A   G
Sbjct: 363 WVGAILVSGALLLTLWSGVLDRRGAVSGEPATVTG 397