Pairwise Alignments

Query, 457 a.a., C4-dicarboxylate transport transcriptional regulatory protein DctD from Xanthobacter sp. DMC5

Subject, 448 a.a., Type IV fimbriae expression regulatory protein PilR from Pseudomonas fluorescens FW300-N2E2

 Score =  301 bits (770), Expect = 4e-86
 Identities = 184/453 (40%), Positives = 260/453 (57%), Gaps = 27/453 (5%)

Query: 18  SRPRVLLVDDEEMIRLSIEQTLDLAGIDVASFASAEAALPAIGRDYPGIVVTDVRLPARD 77
           SR R+L+VDDE  IR  ++ TL    +D  S  +   A   +  +   + +TD+RLP   
Sbjct: 5   SRQRILIVDDEPDIRELLDITLGRMKLDTRSAKNLAEAQNLLAGEAFDLCLTDMRLPDGT 64

Query: 78  GLELLADIRRRDPELPVVLITGHGDVAMAVSAMREGAYDFIEKPFVSDAFVEVVKRALEK 137
           GLEL+  I++R P+LPV +IT +G +  A+ A++ GA+DF+ KP       E+V  AL  
Sbjct: 65  GLELVQHIQQRYPQLPVAMITAYGSLETAIDALKAGAFDFLTKPVDLGRLRELVTSAL-- 122

Query: 138 RALVLENRRLRTALDRGDAIERHLVGQSAAMRRLRDDVAQLASTSADVLVLGETGAGKEQ 197
                   RL      G  +ER L+G S  M  +R  + +LA + A V + GE+G GKE 
Sbjct: 123 --------RLPPVATPGTTLERSLLGDSPPMLSVRKQIEKLARSQAPVYISGESGCGKEL 174

Query: 198 VARALHEGGVRRDKPFVAVNCGAIPESMFESEMFGHEAGAFTGAGKRRIGKIEHASGGTL 257
           VAR +HE G R + PFV VNCGAIP  + ESE FGH  G+F+GA + + G  + A GGTL
Sbjct: 175 VARLIHEQGPRANLPFVPVNCGAIPTELMESEFFGHRKGSFSGAIEDKPGLFQAAHGGTL 234

Query: 258 FLDEVESMPLAMQVKLLRVLQDRRIERLGSNTPVPVDLRVIAATKEDLGALADAGRFRKD 317
           FLDEV  +PLAMQVKLLR +Q++ +  +G      VD+R++ AT +DL     AGRFR+D
Sbjct: 235 FLDEVADLPLAMQVKLLRAIQEKAVRAVGGQQEEVVDVRILCATHKDLDGEVAAGRFRQD 294

Query: 318 LFFRLDVVKLVLPPLRERREDIPLLFELFLVQAAVKYQRPVVEVPPSLRRALMLADWPGN 377
           L++RL+V++L +PPLRERREDI LL    L + A     P V++ P    AL    +PGN
Sbjct: 295 LYYRLNVIELRVPPLRERREDIELLANHMLQRLAANTGSPPVKLHPQALDALRSYRFPGN 354

Query: 378 VRELKNAAER-----HMLGFLAPDF---TGGAAAAP---------SLNELLDRVERLVIE 420
           VREL+N  ER           A D     G  +A P         +L + L+ VER +I 
Sbjct: 355 VRELENMLERAYTLCEQQQIEADDLRLAEGNGSAEPGNPDLMQVDNLEDYLEDVERKLIL 414

Query: 421 DALKASGNRVSAAALALNIPRKTLHDRMKRLGL 453
            AL+ +    +AAA  L +  +++  R+K+LGL
Sbjct: 415 QALEETRWNRTAAAQRLKLSFRSMRYRLKKLGL 447