Pairwise Alignments

Query, 457 a.a., C4-dicarboxylate transport transcriptional regulatory protein DctD from Xanthobacter sp. DMC5

Subject, 446 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  438 bits (1127), Expect = e-127
 Identities = 224/436 (51%), Positives = 311/436 (71%), Gaps = 4/436 (0%)

Query: 22  VLLVDDEEMIRLSIEQTLDLAGIDVASFASAEAALPAI-GRDYPGIVVTDVRLPARDGLE 80
           V L+DDE  IR+++ Q+ +LA ++   FAS E AL AI  +  P ++V+D+ LP   G  
Sbjct: 4   VFLIDDESDIRIALAQSFELADLNAQFFASVEEALLAIKAQGLPLVIVSDICLPGLSGQN 63

Query: 81  LLADIRRRDPELPVVLITGHGDVAMAVSAMREGAYDFIEKPFVSDAFVEVVKRALEKRAL 140
           LL+ +  +D ELPV+LITGHGD++MAV AM +GAYDFIEKPF  +  ++ V RA+EKR L
Sbjct: 64  LLSSVLHQDSELPVILITGHGDISMAVKAMHDGAYDFIEKPFAPERLIDTVHRAIEKRRL 123

Query: 141 VLENRRLRTALDRGDAIERHLVGQSAAMRRLRDDVAQLASTSADVLVLGETGAGKEQVAR 200
            LENR+L+ +L     +   ++G++AA++ LRD +AQ+A T AD+L+ GETG GKE VAR
Sbjct: 124 TLENRQLKRSLKVSQTLGPRIIGETAAIQTLRDTIAQVADTQADILLFGETGTGKELVAR 183

Query: 201 ALHEGGVRRDKPFVAVNCGAIPESMFESEMFGHEAGAFTGAGKRRIGKIEHASGGTLFLD 260
           +LHE   RR++ FVA+NCGA+PE++ ESE++GHE GAFTGA  RR+GK EHA GGTLFLD
Sbjct: 184 SLHEQSSRREQNFVAINCGAVPENLIESELYGHEKGAFTGADSRRVGKFEHAQGGTLFLD 243

Query: 261 EVESMPLAMQVKLLRVLQDRRIERLGSNTPVPVDLRVIAATKEDLGALADAGRFRKDLFF 320
           E+ESMP+  Q++LLRVLQ+R IER+GSN  +P+D+RVIAATK DL   A  G+FR+DL++
Sbjct: 244 EIESMPMQAQIRLLRVLQERVIERIGSNELIPLDIRVIAATKIDLKQAAAEGKFRQDLYY 303

Query: 321 RLDVVKLVLPPLRERREDIPLLFELFLVQAAVKYQRPVVEVPPSLRRALMLADWPGNVRE 380
           RL++V L +PPLRERREDIP LF  FL+ AA +Y +    +  S  ++L+  DWPGNVRE
Sbjct: 304 RLNIVTLTIPPLRERREDIPALFHHFLLVAAARYGKAATALTASDVQSLLSHDWPGNVRE 363

Query: 381 LKNAAERH-MLGFLA--PDFTGGAAAAPSLNELLDRVERLVIEDALKASGNRVSAAALAL 437
           L+NAAER+ +LG LA   +     +    LNE +   E+ ++E  L   G  + A    L
Sbjct: 364 LRNAAERYVLLGKLAQFAESHEPKSKLLGLNEQVAEFEKSLLEQTLIECGGSIKATMERL 423

Query: 438 NIPRKTLHDRMKRLGL 453
           ++PRKTL+D+M++  L
Sbjct: 424 HLPRKTLYDKMQKYQL 439