Pairwise Alignments

Query, 295 a.a., HTH-type transcriptional regulator PerR from Xanthobacter sp. DMC5

Subject, 314 a.a., DNA-binding transcriptional regulator DsdC from Vibrio cholerae E7946 ATCC 55056

 Score =  126 bits (317), Expect = 6e-34
 Identities = 84/294 (28%), Positives = 140/294 (47%), Gaps = 13/294 (4%)

Query: 6   LSALQAFESAARRGSFRVAGEELGISPSAISHAVRKLEDLMGAALFEREGRAVRLNPAGE 65
           LS L  FE AAR  SF +A +EL ++PSAISH + KLE+ +G  LFER  R V L   G+
Sbjct: 19  LSKLHTFEVAARHNSFSLAADELSLTPSAISHRINKLEEEIGIKLFERTHRKVVLTEEGQ 78

Query: 66  ALMRHVAAGFDEMRQGI-EMVGARSVNLLRLHCAPSLAAQWLLPRLRTLLAKQPGLEVRL 124
            +   +    + + Q I ++    +  LL ++  PS A  WL+PR+       P ++++L
Sbjct: 79  RIYHSLQKTLNNLNQEITDIKNGETSGLLTIYSRPSFAQCWLVPRIHAFKELYPSIDLKL 138

Query: 125 AAGVDYPRFEHDEFDADICYGPPRQEGLIVVPLGEETVTPLCAPEMAAR--ISGPLDLLD 182
             G +   F+    D  I +     + L    +  ET+ P+C PE A +  ++  +D L 
Sbjct: 139 LTGNENISFQGSGIDVAIYFDDHMPDKLSCKEIFSETIIPVCTPEYAQKYSLTSSMDNLY 198

Query: 183 HDLIESDNK-------RVRWNHWFESNGVAP-PGPRGSRFDRSFMAIAAAVDGLGIALES 234
           +  +  DN+          W  W  +N +          FDRS +A+ AA++  GIA+  
Sbjct: 199 NTTLLHDNQAWNYNSDADEWKTWANANQLENLENISRIGFDRSDLAVIAAINNAGIAMGR 258

Query: 235 TRLAEREIARGQLVAPLAGKANDVTYVGHYLVFPRAAKARRAVRMFATWITQEL 288
             L +  ++ G+L+ P      +V     Y V     K  + V++F  W+  ++
Sbjct: 259 FSLVKSRLSSGELMTPYPN--TEVICKQRYYVATLPNKHNQKVKLFIDWLESQV 310