Pairwise Alignments

Query, 295 a.a., HTH-type transcriptional regulator PerR from Xanthobacter sp. DMC5

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  123 bits (308), Expect = 6e-33
 Identities = 86/253 (33%), Positives = 131/253 (51%), Gaps = 10/253 (3%)

Query: 5   PLSALQAFESAARRGSFRVAGEELGISPSAISHAVRKLEDLMGAALFEREGRAVRLNPAG 64
           PL++L+ FE+AAR  SF  A EEL ++ +A+SH ++ LE+ +G  LF R  R++ L   G
Sbjct: 7   PLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSLLLTEEG 66

Query: 65  EALMRHVAAGFDEMRQGIEMVGARS-VNLLRLHCAPSLAAQWLLPRLRTLLAKQPGLEVR 123
           ++    +   F  + +  + +  RS    L +   PS A QWL+PRL     ++P ++VR
Sbjct: 67  QSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQEPDIDVR 126

Query: 124 LAAGVDYPRFE-HDEFDADICYGPPRQEGLIVVPLGEETVTPLCAPEMAARISGPL---- 178
           + A VD       D+ D  I YG     GL    L +E + PLC+P +    + P+    
Sbjct: 127 IKA-VDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLG-NKPMEKLS 184

Query: 179 DLLDHDLIESDNKRVRWNHWFESNGVAPPG-PRGSRFDRSFMAIAAAVDGLGIALESTRL 237
           DL  H L+  D  R  W  + + NG+       G  F  S M + AA  G G+AL +  L
Sbjct: 185 DLAYHTLLH-DTSRKDWKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQGVALGNNVL 243

Query: 238 AEREIARGQLVAP 250
           A+ EI  G+L+AP
Sbjct: 244 AQPEIDAGRLIAP 256