Pairwise Alignments

Query, 388 a.a., Acyl-CoA dehydrogenase from Xanthobacter sp. DMC5

Subject, 389 a.a., isovaleryl-CoA dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  255 bits (651), Expect = 2e-72
 Identities = 135/376 (35%), Positives = 218/376 (57%), Gaps = 2/376 (0%)

Query: 8   LSQLIGTIRRFVDERLIPAETEVAESDAIPDEIVAGMRDLGLFGLTAPEDYGGLGLTMAE 67
           +  L   +  F    + P   +V   +A P+EI   +  +GL G+T PE+YGG  +    
Sbjct: 16  VDMLRDAVHDFAQHEIAPIAAKVDHDNAFPNEIWPVLGGMGLLGVTVPEEYGGANMGYLA 75

Query: 68  EVLAVFELGRAAPAFRSMFATNVGIGMQGIAIDGTPEQKAKYLPGLASGDIIGSFALTEP 127
            V+A+ E+ RA+ +    +  +  + +  I  +G   QKAKYLP L SG+ IG+ A++EP
Sbjct: 76  HVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNAAQKAKYLPKLVSGEHIGALAMSEP 135

Query: 128 EVGSDAGSVRTTARREGDTYVLNGTKRFITNAPHASLFTVMARTDPAQKGAAGVSAFAVE 187
             GSD  S++  AR+EGD Y+LNG K +ITN P A+ + + A+TD   KGA G++AF VE
Sbjct: 136 NAGSDVVSMKLHARKEGDRYILNGNKMWITNGPDANTYVIYAKTD-LTKGAHGITAFIVE 194

Query: 188 RGTPGLSTGKVEKKMGQQGAHVCDVIFEDCRVPASALIGGVEGQGFKTAMKVLDKGRLHI 247
           RG  G S  +   K+G +G++ C+++FED  VP   ++GG+   G K  M  LD  R+ +
Sbjct: 195 RGFKGFSQAQKLDKLGMRGSNTCELVFEDVEVPEENILGGL-NNGVKVLMSGLDYERVVL 253

Query: 248 AAACVGLSERILDDMLAYAVGRRQFGRPLADFQLLQAMFADSKADAYAARCMVLDAARKR 307
           +   +G+    +D ++ Y   R QFG+ + +FQL+Q   AD      AA+  V   A+  
Sbjct: 254 SGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKAYVYSVAKSC 313

Query: 308 DAGEDVSVEASCAKMFASEAVGRIADRNVQVHGGNGYIREYRAEQLYRDARLFRIYEGTT 367
           D GE    +A+ A ++++E   ++A   +Q+ GGNGY+ EY   +L RDA+L+ I  GT+
Sbjct: 314 DRGETTRKDAAGAILYSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAKLYEIGAGTS 373

Query: 368 QIQQIIIAKALTAEAK 383
           +I++++I + L  E+K
Sbjct: 374 EIRRMLIGRELYNESK 389