Pairwise Alignments

Query, 305 a.a., Glycine cleavage system transcriptional activator from Xanthobacter sp. DMC5

Subject, 303 a.a., glycine cleavage system transcriptional activator, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  139 bits (350), Expect = 8e-38
 Identities = 86/272 (31%), Positives = 144/272 (52%), Gaps = 4/272 (1%)

Query: 13  RSLPSLQTLRCFEAAARLGSFTSAAEEMCITHSAVSHQIRAMEEAVGQPLFTRQGNRMAL 72
           R LP L  ++ FEAAAR  SFT AAEE+ +T +AVSHQI+A+E+ +G  LF R+   + L
Sbjct: 3   RRLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSLLL 62

Query: 73  TVAGRTLAAETRRALDYLSQAYAVAHAQTVPRPQMLNMSLQVALAEHFLLPRLNEFKQVL 132
           T  G++   + +     L+ A     A++      L +S+  + A  +L+PRL++F +  
Sbjct: 63  TEEGQSYFLDIKDIFIQLADATDRLLARSA--IGSLTVSMSPSFAIQWLVPRLSKFSEKN 120

Query: 133 GPVVLRMTSLADLDEKCPDDTDIALVYGTGDVPGMIVEKIADEEVFPVCSPAFLARYPDL 192
             + +R+ ++        DD D+A+ YG G+ PG+  +K+ +E + PVCSP  L     L
Sbjct: 121 PEIDVRIKAVDTEASSLTDDVDVAIYYGLGNWPGLRADKLRNEVLIPVCSPMLLNGPKPL 180

Query: 193 SLERMPEVPLLLH--SQVTWNLWLEKANLPIVYPTQSTLLDDIALTIRGALAGQGIAMAR 250
           S     +   LLH  S+  W  W  +  +  +   Q  +    +L ++ A  GQG+A+  
Sbjct: 181 SKPEDLKHHTLLHDMSRHDWQAWFRQCGITDINVNQGPIFSHSSLVLQAAAHGQGVALGY 240

Query: 251 SLVVRDYLRTGELVRLFDLSVPGIFSYHLACR 282
           S++ R  ++ G LV  F   +    +Y+L C+
Sbjct: 241 SVLARPDIKAGRLVCPFQEVLVSKDAYYLVCQ 272