Pairwise Alignments

Query, 626 a.a., ATP-dependent RNA helicase DeaD from Xanthobacter sp. DMC5

Subject, 499 a.a., ATP-dependent RNA helicase from Sinorhizobium meliloti 1021

 Score =  228 bits (580), Expect = 6e-64
 Identities = 137/379 (36%), Positives = 201/379 (53%), Gaps = 6/379 (1%)

Query: 13  ALAERDYDNPTPVQLAVLAPEASGRDLLVSAQTGSGKTVAYGLAMAETLLGAEERFEFAS 72
           A+ +  Y  PTP+Q+  + P    RD+L  AQTG+GKT ++ L M   L     R   A 
Sbjct: 16  AVTDAGYTIPTPIQVGAIPPALQRRDILGIAQTGTGKTASFVLPMLTLLEKGRAR---AR 72

Query: 73  VPQALVVAPTRELALQVQREFAWLYAATGARIVSCVGGMDPRQEQRLLARGAHIVVGTPG 132
           +P+ L++ PTRELA QV   F          I   +GG+   ++ R L RGA +++ TPG
Sbjct: 73  MPRTLILEPTRELAAQVAENFDKYGKNHKLNIALLIGGVSFDEQDRKLERGADVLICTPG 132

Query: 133 RLRDHLERGRLDLSALRVAVLDEADEMLDLGFREDLEFILDATPPERRSLLFSATMPRGI 192
           RL DH ERG+L ++ + + V+DEAD MLD+GF  D+E I    P  R++L FSATMP  I
Sbjct: 133 RLLDHCERGKLLMTGVEILVIDEADRMLDMGFIPDIERIAKLIPFTRQTLFFSATMPPEI 192

Query: 193 IALAKRYQRDALRIEVAGAEGGHADIEYRTMRVAPTEVEHAVVN---VLRYYDTPSAIVF 249
             LA R+ ++  R+EVA        +  R +     + E   V    +    D  +AI+F
Sbjct: 193 QKLADRFLQNPERLEVARRSSTAITVTQRFVAAHGKDYEKRAVLRELIRSQEDLKNAIIF 252

Query: 250 CNTRETVRRLHAMLQERQFSAVALSGELSQNERNHALQALRDGRARVCVATDVAARGIDL 309
           CN ++ V  L   L    FS  AL G++ Q  R   L   +DG  ++ VA+DVAARG+D+
Sbjct: 253 CNRKKDVAELFRSLDRHGFSVGALHGDMDQRSRMAMLANFKDGNIKLLVASDVAARGLDI 312

Query: 310 PNLGLVIHADLPNDGESLQHRSGRTGRAGRKGVSVLLVPPFRRRRAEDLMRAIGIRPSWS 369
           P++  V + D+P   E   HR GRTGRAGR G +  +V     + ++ + + IG +  W 
Sbjct: 313 PDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGAAFTIVTKRETKFSDAIEKLIGQKVEWF 372

Query: 370 GPPTSEDIRKLDHERMLRD 388
               SE    ++     RD
Sbjct: 373 NGDLSELPEPMESHDSRRD 391