Pairwise Alignments

Query, 626 a.a., ATP-dependent RNA helicase DeaD from Xanthobacter sp. DMC5

Subject, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

 Score =  231 bits (589), Expect = 6e-65
 Identities = 160/512 (31%), Positives = 266/512 (51%), Gaps = 18/512 (3%)

Query: 10  LAQALAERDYDNPTPVQLAVLAPEASG-RDLLVSAQTGSGKTVAYGLAMAETLLGAEERF 68
           + +AL ++ + NPTP+Q   +     G RD++  AQTG+GKT A+G+ + ET+       
Sbjct: 13  ILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPILETI------D 66

Query: 69  EFASVPQALVVAPTRELALQVQREFAWLYAATGARIVSCVGGMDPRQEQRLLARGAHIVV 128
           E +   QAL++APTRELA+QV  E   +  +    +    GG    ++ R L RG  IVV
Sbjct: 67  EHSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELRRGVQIVV 126

Query: 129 GTPGRLRDHLERGRLDLSALRVAVLDEADEMLDLGFREDLEFILDATPPERRSLLFSATM 188
           GTPGR+ DH+ R  + L  +   VLDEADEML++GF +D+E IL +   ++R LLFSAT+
Sbjct: 127 GTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTDKRMLLFSATL 186

Query: 189 PRGIIALAKRYQRDALRIEVAGAEGGHADIEYRTMRVAPTEVEHAVVNVLRYYDTPSAIV 248
           P  I+ LAK Y R+   I+V   +      +     +   +    +  ++        ++
Sbjct: 187 PDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRDKFELLSRIIDTEKEFYGLI 246

Query: 249 FCNTRETVRRLHAMLQERQFSAVALSGELSQNERNHALQALRDGRARVCVATDVAARGID 308
           FC T+  V  +   L E+ ++A  L G+++Q +R   L   +  +  V VATDVAARGID
Sbjct: 247 FCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQREKTLDKFKGKKINVLVATDVAARGID 306

Query: 309 LPNLGLVIHADLPNDGESLQHRSGRTGRAGRKGVSVLLVPPFRRRRAEDLMRAIGIRPSW 368
           + +L  V++ D+P + ES  HR GRTGRAG++G ++  V P   R+ + + +        
Sbjct: 307 INDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAITFVEPSEFRKFKYIQKIAKTEIKR 366

Query: 369 SGPPTSEDI---RKLDHERMLRDALITDEPSEEDSSAGLALLAAHSPEHLAAALARLYRA 425
              P  +DI   +K+     +++ L + + ++ +  A   L  A   E L+A L    + 
Sbjct: 367 EEVPDVKDIISAKKIKIISGIKEVLESGKYADCEKMASDLLEDADPQEVLSAVLKYALKD 426

Query: 426 GLPAPE-EVADPGEPRAAR----DRAAGRDFDGGSGAGSVWFRLNVGRRNNADPKWLLPL 480
            L     +    G  R+ R    D    R F  G    +V   + +G+ +  +PK L+  
Sbjct: 427 ELSESNYKKIGRGSQRSERSGRNDSRGRRSFAPGE---NVRLFVALGKLDKMNPKKLVDH 483

Query: 481 ICRRGNVTRKEIGVIRIFDEETAFEVSLAAAD 512
           I R+ +V  ++I  +++F++ +   VS + A+
Sbjct: 484 ISRKSDVKGRDIDDVKVFEKFSFVTVSSSDAE 515