Pairwise Alignments

Query, 321 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 338 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 49.7 bits (117), Expect = 1e-10
 Identities = 52/236 (22%), Positives = 93/236 (39%), Gaps = 18/236 (7%)

Query: 19  AFASPASAQNPKLRVGGTPNYGPVLPIMAAEKLGLFKKAGVDVEFSGYQGGSASMEALAA 78
           A +  A+A   K+ V  TP   P      A++LG FK+ G+DVE     GG    +AL  
Sbjct: 33  AISVNANAAPIKIAVSQTPLSSP---FYLADQLGFFKQQGIDVELVACSGGVQCSQALFQ 89

Query: 79  GEADIVNFIPPGLALARARGVKARIISAGTITPRGWWVMSREDSSIKTIKDLVGKKVGTS 138
           G              +        I+++   +     +++ E  +I+++ DL  K+VG  
Sbjct: 90  GAVSYATASESVAMFSSFERQDFLILASFVQSDNDLKLLALESETIRSVADLHNKRVGMI 149

Query: 139 SPGAATDVF--ALWVESQSGGTFTRVPVGGSGLIPNLTAKNVDAVVAFPPVSYRIASSGL 196
              A+   F   L   +  G    +V      L   L  K +DA+  + P  Y+I  +  
Sbjct: 150 RASASEFYFDSLLLANNLKGIPIDKVYGTADQLYQQLFDKQLDAISIWEPWGYKIGVAAE 209

Query: 197 GRVVVDLGAAMKPNVPDVWVASDEAIAKKPEAVKK------FLAAFYGAVRYMQEN 246
            +V          ++P ++  S   +  KP   ++       L A   A+ ++ +N
Sbjct: 210 SKVT-------NLSLPGIYTLSFNLLTMKPTTEEEKQRSLAILKALKQAIDWIHQN 258