Pairwise Alignments

Query, 321 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 382 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score = 57.0 bits (136), Expect = 7e-13
 Identities = 77/284 (27%), Positives = 120/284 (42%), Gaps = 43/284 (15%)

Query: 56  KAGVDVEF-SGYQGGSASMEALAAGEADI-VNFIPPGLALARARGVKARIISAGTITPRG 113
           K   +VEF    +GG+  M  +A G+ D+ +N +PP +  +  +G  A+I+S       G
Sbjct: 82  KLVANVEFIKVIEGGAKIMTLMAQGQVDVGLNGVPPAV-FSIDQGTNAKIVSPAQ--SEG 138

Query: 114 WWVMSREDSSIKTIKDLV-----------GKKVGTSSPGAATDVFALWVESQSGGTFTRV 162
             ++ R D   +T  + V             K+G   P +   V         G T+T  
Sbjct: 139 SAIVIRSDIPAETWDEFVVYIKEQADSGVQLKIGHPLPTSIQYVMIKSALDTEGITYTEN 198

Query: 163 P-----------VGGSGLIPNLTAKN-VDAVVAFPPVSYRIASSGLGRVVVDLG----AA 206
           P             G G +P L + N +DAV+A+ P   ++A  G+G+ V+  G    A 
Sbjct: 199 PNDKDAMVQLINCKGQGTMPQLLSSNELDAVIAWEPTPEQLAVLGIGKSVIYSGDIPPAG 258

Query: 207 MKPNVP-DVWVASDEAIAKKPEAVKKFLAAFYGAVRYMQENRAWTVKFIDEATKFGEAVA 265
           M  N P  V+VAS++A+  K E+VK FL     A   +  N    V     A   G  + 
Sbjct: 259 MWVNHPCCVFVASNDAVENKRESVKAFLKLMALANNEITANPKLAVN--ASAEWLGTDLE 316

Query: 266 GEE-------FDNTVKGLSADG-AFKQEWVEESLKLATLAGMKE 301
            EE       F N +  L A G  F +   E+      LAG+++
Sbjct: 317 VEELSIPNIGFTNEIGSLEAIGPEFVKVMDEQGAMTGQLAGLED 360