Pairwise Alignments

Query, 356 a.a., P-loop guanosine triphosphatase YjiA from Xanthobacter sp. DMC5

Subject, 329 a.a., GTP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  122 bits (305), Expect = 2e-32
 Identities = 78/229 (34%), Positives = 126/229 (55%), Gaps = 19/229 (8%)

Query: 8   KIPVTVLTGYLGAGKTT-LLNRILSQPHGKKFAVIVNEFGEIGIDNDLVVGADEEVFEMN 66
           ++P  ++TG+LG GKTT +L+ + ++P  +K+AV+VNEFGEIGID  ++      + E+ 
Sbjct: 4   RVPTNIITGFLGVGKTTAILHLLATKPAHEKWAVLVNEFGEIGIDGAIMSEQGAMIKEVP 63

Query: 67  NGCICCTVRGDLIRIIDGLLRRKGGFDGIIVETTGLADPAPVAQTFFVDEEVQAKTKLDA 126
            GC+CCT    +   I+ LLR+K   D +I+E TGL  P  V  T  + E+ Q    L A
Sbjct: 64  GGCLCCTAGVPMSVGINALLRQKP--DRLIIEPTGLGHPKQVVAT-LISEQYQPYVDLKA 120

Query: 127 VVTVADAKWLS-DRLKDAPEAKNQVAFADVILLNKTDLVTGAELDAVEARIRGINPYAKL 185
            + + D + LS D+ +      +Q+A AD++L NK D  + +++DA    +    P AK 
Sbjct: 121 TIALMDPRHLSMDKYRSNQNFNDQLASADIVLGNKVDQCSSSDIDAFNDWVTDQTP-AKT 179

Query: 186 YRTQKSEIDIAKVLNQGAFDLERVLELEPAFLEEDDH---HHHHHAHGE 231
           +         ++++ QG F +E +L++         H   HHHHHA  E
Sbjct: 180 F---------SQLIKQGQFPIE-LLDMPRLVGHASTHIDSHHHHHAADE 218