Pairwise Alignments

Query, 1027 a.a., Efflux pump membrane transporter BepE from Xanthobacter sp. DMC5

Subject, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

 Score =  864 bits (2232), Expect = 0.0
 Identities = 457/1014 (45%), Positives = 657/1014 (64%), Gaps = 12/1014 (1%)

Query: 4    FTDIFIRRPVLAIVVSLMILVLGLRAMSSMPILQYPRTQNAIVTVSTTYPGADPDVVAGF 63
            FTD+FI+RPVLA+ +S +I++LGL+A+  M + +YP   N ++TVST Y GA  D++ GF
Sbjct: 3    FTDVFIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQGF 62

Query: 64   ITTPLENAIAQANGIDYMTSTSTTGTSTITANLRLNYDTGKALTEINTKVNSVLNQLPSG 123
            IT PLE A+AQA+ ID+MTS S  G STIT  ++LN D   AL+++  K NSV +QLP  
Sbjct: 63   ITQPLEQAVAQADNIDFMTSQSVLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLPKE 122

Query: 124  TQQPVLTVKVGQTIDAMYIGFRSDAIAGNQITDYLIRVVQPKLQAVQGVQTAELLGSKTF 183
             + P +T+  G T   +YIGF S+ +A +QITDYL RVV P+L AV GV + +L G   +
Sbjct: 123  AEDPTVTMSTGSTTAVLYIGFTSNELASSQITDYLERVVNPQLYAVNGVSSIDLYGGMKY 182

Query: 184  AMRAWLDPIRLAAYGVTASEVSTALTRNDYIASLGNTKGQMVQVNLTASTSLHNVEEFRN 243
            A+R WLDP ++AA  ++A++V + L  N+Y ++ G   G+ V  N +A T +  VE+  +
Sbjct: 183  ALRVWLDPAKMAALNLSAADVMSILNANNYQSATGQAIGEFVLYNGSADTQVSTVEDLES 242

Query: 244  LIVKEANGAIVRLKDVANVTLGADDYDSATMFDGRESVYIGIQIAPTANLLDVIKGVRAV 303
            L+VK   G + RL D+A VTL           +GRE+V   I  AP+AN +++ K V  +
Sbjct: 243  LVVKAEKGTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINIAKDVLEM 302

Query: 304  LPDIESQLPTGLSMGVIYDSSAFVNSSIEEVIHTLVEALAIVTLVVFAFLGSWRSVLIPV 363
            LP+++  +P+ + M V+YDS+  +N SI EVI T+VEA  IV +V+  FLGS R+VLIP+
Sbjct: 303  LPELQKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLRAVLIPI 362

Query: 364  IAIPLSLIGTFLMMLAFGFSINLLTLLALVLAIGLVVDDAIIVVESVNHHMEEGMSALQA 423
            + IPLSLIG  ++M   GFS NL+TLLA+VLAIGLVVDDAI+V+E+V+ H++EG S  +A
Sbjct: 363  VTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGESPFRA 422

Query: 424  AFASARQLANPIIAMTVVLIAVYVPIGFQGGLTGALFTEFAFTLVGAVTISAVVALTLTP 483
            A    R++A P+IAMT+ L AVY PI   GG+TG+LF EFA TL G+V +S +VALTL+P
Sbjct: 423  AIIGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIVALTLSP 482

Query: 484  MMSAYMLKPVDHAGGDLESRMVLAVDRVMGAVTAAYSRSLTGALNYMPVTAVFAGLVLCS 543
            MM + MLK       +  ++  L V  ++  +TA Y R LT  + + PV   FA +V  S
Sbjct: 483  MMCSKMLK-----ANEAPNKFELKVHHLLDRMTARYERMLTAVMAHRPVVIAFAFIVFAS 537

Query: 544  VYWLYGTAQSELAPEEDQGIILAQSISAPNATLQQKLLYNRQTYETFAKHPETE--TVFQ 601
            +  L+    SELAP ED+G+I+       NA L           +  +  PE +   VF 
Sbjct: 538  LPMLFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNKILSDQPEVQFAQVFT 597

Query: 602  -VESTGTSIAGWVLKPWDERKATTKSLQPMIQQELNAIAGQKIVAFQTSPLPGS-NGLPM 659
             V ++  +     + PW +R+A+  ++   +   +  I G  + AFQ   LPG+ +GLP+
Sbjct: 598  GVPNSNQAFGIASMVPWSQREASQATVTNRVGTLVQDIPGMAVTAFQMPELPGAGSGLPI 657

Query: 660  QIVIGTSDGFDKLNEVAAKFMQEALDTGLFIFLNNDLKIDQPQASIVIDREKTSLLGLSM 719
            Q VI T   F+ L  +A   + E     +F++ + DL  D     I ID++K    G++M
Sbjct: 658  QFVITTPSNFESLFTIATDVLTEVKANPMFVYSDLDLNFDSATMKINIDKDKAGAYGVTM 717

Query: 720  SDVGGALSSLLGGGYVNYFSLDGRSYKVIPQVKQEARLNTDQVLDYYMRMSDGTMIPLST 779
             D+G  LS+++  GYVN   L+GRSY+VIPQV+++ RLN + +  YY+R +DG +IPL +
Sbjct: 718  QDIGITLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNSYYVRAADGKVIPLGS 777

Query: 780  VARIETKTVPESLNHFQQVNAATIAGVVAPGVTTGDAITVLKDLAKRTLPTGYTLDFGGA 839
            +  I+    P SL HF Q+N+AT+  V APG   GDAI   ++LA   LP GY+ D+ G 
Sbjct: 778  LVTIDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGDAINWFENLASSKLPKGYSHDYMGE 837

Query: 840  SRQYVQESGGFVTTFAFALIVIFLSLAALFNSFRDPVVILLSVPMSLAGALLFISVGIGG 899
            +RQYV E      TF  AL +IFL LA  F S RDP+VI++SVP+++ GAL  I++  G 
Sbjct: 838  ARQYVTEGSALYATFGLALAIIFLVLAIQFESLRDPLVIMVSVPLAICGAL--IALAWGT 895

Query: 900  ASINIYTQVGLTTLMGLISKHGILMLEVANELQLDGK-SKREAIIEAATLRLRPILMTTA 958
            A++NIY+QVGL TL+GLI+KHGIL+ EVA E QL  K S+ EA++ AA +RLRPILMTTA
Sbjct: 896  ATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIEAVMHAAKVRLRPILMTTA 955

Query: 959  AMVLGVVPLIFASGAGAASRFNLGLVIATGLAIGTLFTLYVVPTAYVLMGQTHR 1012
            AM+ G++PL++A+GAGAA RF++G+VI +GLAIGTLFTL+V+P  Y  + + H+
Sbjct: 956  AMIAGLIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFTLFVLPVIYSYLAEKHK 1009