Pairwise Alignments

Query, 411 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 422 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

 Score = 60.8 bits (146), Expect = 7e-14
 Identities = 61/277 (22%), Positives = 115/277 (41%), Gaps = 27/277 (9%)

Query: 3   KLTKRAVDAAEAGAKDYVIWDDELPGFGLRVFTSGKRSYVLQYR--SAGRSRRFTIGLHG 60
           KLT + + A++   K+Y ++D +  G  LR+  +G + ++  Y   + G+    + G++ 
Sbjct: 7   KLTDKEIKASKPREKEYNLFDGD--GLRLRIKPNGSKQWIFNYYRPTNGKRANLSFGMYP 64

Query: 61  VWTPERARKEAKAQLGRIAQGDDPAEERLLDRKALTVKELCDLYLADLQAGLILGKGGRP 120
             +  +ARK   +    IAQG DP ++R   R+    KE+ +    ++       K  + 
Sbjct: 65  DISLLQARKSLLSAKELIAQGIDPQDDR--KRQQQVHKEIHEHTFENVTKDWFAIK--QN 120

Query: 121 KKPGTIASDLGR-IHRHIVPLLGSRRVRDLTKADITKAMKDIMAGKTRVTVKTKNLRGKS 179
                 A D+ R +  HI P +  + V+ +T  +I + +K I A                
Sbjct: 121 DVTPDYALDIWRSLELHIFPHISDKPVKAITAPEIIELLKPIEA---------------- 164

Query: 180 IVKGGAGTATRTIGLFGGILTYAVEAGIIETNPAHGVRRPKDNVRARRLSEAEYRVLGDL 239
             KG   T  R       ++ +A   G+I+ NP  G++      +   ++      L +L
Sbjct: 165 --KGSLETVKRLTQRLNEVMNFATNCGLIQANPLTGIKAAFKKPKKENMAALTPAELPEL 222

Query: 240 LKAAAEKESYRMSVEIIRQIALTGCRRMEMISLQWDE 276
           + A A     R +  ++     T  R  E    +WDE
Sbjct: 223 MSAIANASIKRTTRCLLEWQLHTMTRPAEASGARWDE 259