Pairwise Alignments

Query, 262 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

Subject, 266 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  125 bits (314), Expect = 9e-34
 Identities = 71/227 (31%), Positives = 122/227 (53%), Gaps = 2/227 (0%)

Query: 24  FLMGPIIIAGIVAFSSGDRLEFPIPGFSLRWFVVALQTPQYIEGLTVSVIIGLGNALLAT 83
           FL+ PI+   +++F S   L FP PG++LRW+   L+ P++++    S  I +   +L+ 
Sbjct: 25  FLLLPILFIAVLSFGSSQWLIFPPPGWTLRWYQELLEDPRWLDSAWTSFRIAIIVTVLSV 84

Query: 84  IAGTGAAIALHRYRFRGRSAVQALVMLPIAMPAIVLGLGLLFTLAVYDMRPGILAATLGH 143
           + G   +  L+R RF  R A++AL + P+ +P +VL + L        +   +    + H
Sbjct: 85  LLGLVTSFGLNRGRFLFREALKALFLTPMILPVVVLAVALYAFFLQIGLNGTLTGFVISH 144

Query: 144 AVLGVPYVVAMVSAALANHDGSLERASMNLGVGPVGTFFRVTLPMIRGGVIAGAVSAFLI 203
            VL +P+ +  ++ AL   D S+E A++  G  P     RVTLP I  GV + A+ +FL 
Sbjct: 145 LVLALPFSILSITNALEGFDKSIEDAAVLCGASPFEAKIRVTLPAISHGVFSAAIFSFLT 204

Query: 204 SFDNFSLSLFITRG--DTLPLRLMQQLLAYADPSVAAISTLLVFASL 248
           S+D   +++F+      TLP+++   L     P VAA STLL+  ++
Sbjct: 205 SWDEVVVAIFMASPTLQTLPVKVWSTLRQDLTPVVAAASTLLILLTV 251