Pairwise Alignments

Query, 262 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

Subject, 276 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  145 bits (365), Expect = 1e-39
 Identities = 85/251 (33%), Positives = 133/251 (52%), Gaps = 3/251 (1%)

Query: 15  RFFAAFVVLFLMGPIIIAGIVAFSSGDRLEFPIPGFSLRWFVVALQTPQYIEGLTVSVII 74
           R  A  +  F+  P+ I   ++FSS   L FP PG++L+ +V     P + + LT S++I
Sbjct: 6   RSLAILIAAFVAAPMFIVIPMSFSSAASLAFPPPGYTLQNYVNFFSDPNWTQPLTNSLLI 65

Query: 75  GLGNALLATIAGTGAAIALHRYRFRGRSAVQALVMLPIAMPAIVLGLGLLFTLAVYDMRP 134
           G G   +  +    A+ AL R+ F GR+    L+MLP+ +P IV+ LG         +  
Sbjct: 66  GFGTVCVTMLVAVPASFALVRHVFIGRTVFNLLIMLPMIVPTIVMALGYYIYFGQLRLVQ 125

Query: 135 GILAATLGHAVLGVPYVVAMVSAALANHDGSLERASMNLGVGPVGTFFRVTLPMIRGGVI 194
             L   L H+ + +P    +++AAL   D S+ERA+MNLG  P  TF  +T P++R    
Sbjct: 126 SYLGVILAHSCIALPMSTLILTAALKGFDRSVERAAMNLGASPFATFRLITFPILRPAFT 185

Query: 195 AGAVSAFLISFDNFSLSLFITRGD--TLPLRLMQQLLAYADPSVAAISTLLVFASLAGMA 252
              + AF+ SFD   ++LFI+  D  TLP ++   +   ADP+++A S+ L    LAG+ 
Sbjct: 186 VAGLFAFIASFDEAVIALFISGRDKATLPRQMFNAVRQEADPTISAASSFLFLLVLAGVC 245

Query: 253 A-LLPLALRGR 262
             L P  +R R
Sbjct: 246 IWLAPQLVRRR 256