Pairwise Alignments

Query, 687 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

Subject, 691 a.a., PAS from Pseudomonas syringae pv. syringae B728a

 Score =  269 bits (687), Expect = 4e-76
 Identities = 193/567 (34%), Positives = 295/567 (52%), Gaps = 53/567 (9%)

Query: 130 LKGRQRQYEARARMEQLHEGEERLRTALLAGRLGAFELNFQNWTLMTSATCRTLLGRAVD 189
           + GR+   + R R+ +L     R+ TA + G + A +L  +   L+ +     L+G+   
Sbjct: 141 IDGRRTAEDERDRLNELL----RIFTAAVPGVVYAKDL--EGRMLVANRGTADLIGKP-P 193

Query: 190 EPFAFDDLLQAIHADDRSNVLAAIDGAARSGG--DLVEEFRVPWRDGSTHCVEIRARAVR 247
           E F     L+ +   +++  L   D         + +EE +V   DGS          + 
Sbjct: 194 EFFIGKTDLEFLDDQEQARTLMETDRRIMQSNVSEQIEE-QVNLADGSAAIWLSTKAPLL 252

Query: 248 DRSAANPRLVGVLSDVTDRKARQDALTRMNEILEERVAARTAELTASHAAVLAEMEQRKR 307
           D S     L+G   DVT RK  ++A+  +N+ LE+R+     E              R++
Sbjct: 253 DASGDVIGLIGSSIDVTARKKAEEAVRELNQTLEQRIEQAVFE--------------REQ 298

Query: 308 AEEQLRQVQKMETIGQLTGNVAHDFNNLLTAVIGNLELLRKRVAND-----PRAVRLVDG 362
            E+ LR  QKM+ +GQLTG +AHDFNNLL  + G+LEL+ KR+A        R V +  G
Sbjct: 299 IEDALRHSQKMDAVGQLTGGIAHDFNNLLAGISGSLELITKRLAQGRVGDVDRYVSVAQG 358

Query: 363 ACQGAQRGAALTQRLLAFARRQDLKVEPRSLTDLVSGAVDLIERSIGSRIELRLHLSQDS 422
           A    +R A+LT RLLAF+RRQ L      +  L+    +LI R++G  I++++    D 
Sbjct: 359 A---VRRAASLTHRLLAFSRRQTLSPRVTDVNGLIHDMEELIARTVGPEIDIKVVAHDDL 415

Query: 423 PPALVDANQIELALLNLVVNARDAMPNGGVVSISVDHPQ----AAPGAGLPEGPYVRLTV 478
            PAL+D  Q+E +LLNL +NARDAMPNGG + I   +        P  G+P G ++ + V
Sbjct: 416 WPALIDHAQLESSLLNLCLNARDAMPNGGRIIIETANASLEECTDPDHGIPAGEHLSIRV 475

Query: 479 SDTGYGMDAETLEKATEPFFSTKEQGKGTGLGLSMVHGLAVQLNGALRLSSEVGAGTRAE 538
           +DTG GM  +   KA EPFF+TK  G GTGLGLSMV+G   Q  G +R+ S  G GT   
Sbjct: 476 TDTGIGMSPDIAAKAFEPFFTTKAIGAGTGLGLSMVYGFVRQSGGQIRVESVEGQGTSVV 535

Query: 539 LWLPATTPLVGEEKRAPISVGREMEE-------LNVLVVDDDFLVAFSTVEMLRDLGHRV 591
           + LP  T      + AP  V  E+ E         VLVVDD+  V     E++  LG+  
Sbjct: 536 MHLPRHT-----AESAPRPVAPEVIEEPPHHTGETVLVVDDEPSVRMLVAEVISGLGYNC 590

Query: 592 VESSSGEDALEIIRNDSTVDIMVTDFSMP-RMNGAQLASAARRLRPDLPILLASGYAE-- 648
           +E++  +  L+I+++D+ +D++++D  +P  MNG ++A AA   RP LP L  +GYA+  
Sbjct: 591 LEAADAQSGLQILQSDTRIDLLISDIGLPGGMNGREMADAAGDCRPGLPTLFITGYAKTS 650

Query: 649 -LPSDSIRDLPRI-AKPYQQEQLAAEI 673
            L    +R   ++  KP+  + LA  +
Sbjct: 651 VLDDCHLRPCTQVLTKPFGLDALAGRV 677



 Score = 48.9 bits (115), Expect = 8e-10
 Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 12/160 (7%)

Query: 135 RQYEARARMEQLHEGEERLRTALLAGRLG--------AFELNFQNWTLMTSATCRTLLGR 186
           R +  +  +    E  ERL+ AL +G +         A +L        T   C  L  +
Sbjct: 9   RPFAPQPPVPSAQEAAERLQLALESGAVVGTWVWDIIADQLTGDERFARTFGLCPKLCAK 68

Query: 187 AVDEPFAFDDLLQAIHADDRSNVLAAIDGAARSGGDLVEEFRVPWRDGSTHCVEIRARAV 246
            +      + ++ +IH DD + V  +I+ A +S      E+RV   DG    +E   R  
Sbjct: 69  GLP----LELVIASIHPDDSARVDKSIEEALQSSETYRCEYRVLHEDGIYRWIEASGRIE 124

Query: 247 RDRSAANPRLVGVLSDVTDRKARQDALTRMNEILEERVAA 286
           RD      R  GVL D+  R+  +D   R+NE+L    AA
Sbjct: 125 RDSRGKPIRSPGVLLDIDGRRTAEDERDRLNELLRIFTAA 164