Pairwise Alignments

Query, 252 a.a., tRNA U34 carboxymethyltransferase from Xanthobacter sp. DMC5

Subject, 323 a.a., tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB from Vibrio cholerae E7946 ATCC 55056

 Score = 60.5 bits (145), Expect = 4e-14
 Identities = 56/196 (28%), Positives = 81/196 (41%), Gaps = 36/196 (18%)

Query: 42  KWRRFADAIPSDLTGLSVLDIGCNGGFYSIEMKRRGAARVVGIDSDEAYLAQARFAAEVA 101
           KW R    I S L    VLD+GC  G++   M   GA +V GID  E +L Q     ++ 
Sbjct: 110 KWDRLLPHI-SPLKNRLVLDVGCGNGYHMWRMLGEGAQQVFGIDPSELFLIQFEAVRKLL 168

Query: 102 G-------LEITFEKRSVYDVARVGERFDIVLFMGVLYHLRHPL-LALDLIRTHVAGDLL 153
           G       L +  E+    +       FD V  MGVLYH R PL   L L    VAG  L
Sbjct: 169 GDDQRVHLLPLGIEQMPELNA------FDTVFSMGVLYHRRSPLDHLLQLKNQLVAGGEL 222

Query: 154 VFQSMLRGSRDVEDQLEDSDFWTTAPFDKGSYPRLHFIEHRYAGDPTNWWVPNRACVEAM 213
           + ++++         +E  +     PFD            RYA     ++ P+   ++  
Sbjct: 223 ILETLV---------VEGDEHTVLVPFD------------RYAQMRNVYFFPSALALKVW 261

Query: 214 LRSSGFEIVGHPEEEV 229
           L  +GF  V   +E +
Sbjct: 262 LEKTGFVDVRIVDENI 277