Pairwise Alignments

Query, 415 a.a., Inner membrane transport protein YdhP from Xanthobacter sp. DMC5

Subject, 397 a.a., putative transmembrane efflux transmembrane protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  219 bits (559), Expect = 9e-62
 Identities = 133/379 (35%), Positives = 206/379 (54%), Gaps = 13/379 (3%)

Query: 35  LLALALGSFVIGTSEFASMGIIQLFSEGLGLTVPQATGAITAYAFGVVIGAPLVTLTAAR 94
           L ALAL +F IGT+EF  +G+I   +  L +++P A   ++ YA GV +GAP++T     
Sbjct: 5   LFALALSAFAIGTTEFVIVGLIPTMAADLNISLPSAGLLVSLYALGVAVGAPVLTALTGS 64

Query: 95  LNRRTLLLALMALFMAGNLLSAVASDLGWLMAARFISGLPQGAYFGAGAVVAAHVVGAGQ 154
            NR+ +LLA+MALF+ GNLL+  A     L+ AR ++GL  G +F  G+ +A  +V   +
Sbjct: 65  WNRKRVLLAVMALFVLGNLLAWQAPGYATLVVARVLTGLAHGVFFSIGSTIATGLVAKEK 124

Query: 155 AGRAFAIVMTGLTVATIFGSPLATFMGQTLGWRETYLAVAILAALALAALRQWVP----R 210
           A  A AI+ TGLTVA + G PL T++GQ+ GW+ T+L VA+L  LAL      VP    +
Sbjct: 125 AASAIAIMFTGLTVALVTGVPLGTYIGQSFGWQATFLIVAMLGLLALIGSAFLVPGNLKQ 184

Query: 211 TPALDGVPVLQELSALRKTSVWGMMLVAAIGVGSIFAVYTFIGPIVTDAAGLPATLIPVA 270
            PA      L+ L+  R   V+G   + A+G G  F  +TF+ PI+   AG  A  I + 
Sbjct: 185 PPATKLSAQLKVLTQPRLLLVYG---ITALGYGGTFTAFTFLAPILQTEAGFSAGAIGLI 241

Query: 271 LAVFGLGMTAGNLFGGWIADRY-PARGIVIGYGSALVVMAALATGGSHIWLLLPGLFGVG 329
           + V+G+ +  GN++GG +AD+  P + + + +     ++           L +  +   G
Sbjct: 242 MLVYGVSVAVGNIWGGKMADKMGPIKALTVIFSGLAAILLVFNFTAYDPVLAVATILVWG 301

Query: 330 ATMMVAIPTIQVRLTT----FAPEAPTLMGAMNLASLNAANALGAWSGGLAIDAGFGLLS 385
           A     +P +QV + T    +AP+A  +   +N+A+ N   ALG+W GG  I A  GL+ 
Sbjct: 302 AFAFGNVPGLQVYVVTLAEKYAPDAVDVASGLNIAAFNVGIALGSWGGG-EIVARSGLMH 360

Query: 386 AVWAGFGLTLAGLTLFGLT 404
             W G  + L  L L  L+
Sbjct: 361 TPWVGAAVVLLALGLTRLS 379