Pairwise Alignments

Query, 345 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 333 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  124 bits (310), Expect = 4e-33
 Identities = 97/312 (31%), Positives = 153/312 (49%), Gaps = 19/312 (6%)

Query: 28  LCAAMLVAGLPAILSGYGLLALRDGLIMGLFAVSYDLIWGKARTLTLGHGAFFGLGAYGF 87
           L   +++AG+  +L    L  L     + L  +S DL+ G     TLGH A FG GAY  
Sbjct: 25  LAVILVLAGIGYLLFPNNLALLTRITAIALLVLSLDLVTGYCGVATLGHAALFGSGAYAA 84

Query: 88  AIATVPFGLS-----VGAGLVLGVAAAGLLAVLVGYFLIYANVRLHFFA--VITVALLVI 140
            IA V FG++     + AG +LG A AGL   +V        +R H     V+++AL+ +
Sbjct: 85  GIAAVHFGITDPLLMLAAG-ILGGALAGLACGVV-------ILRAHGLPQLVLSIALIHL 136

Query: 141 LGQLAVSWSSVTGGDVGILGVPGLPVL-FGAVDLSADLPSFYLVAAVLLAVI-LLLWSGC 198
             + A   SS TGG  G+ G+   P++   A DL     + Y+   VLLA++ +LL    
Sbjct: 137 FHEFANKASSWTGGSDGLAGISPDPLIGLFAFDLWGR--TAYVFGVVLLAIVFVLLRLVV 194

Query: 199 RGNYGRVLAAIGMNEFRAKTFGYDTSFHILMAFVASAVLAGAAGALFATTSGVVAPDLFS 258
           R  +G +   I  +  R +  G   +  +L  +V S  +AG  GAL A ++ VV  D  S
Sbjct: 195 RSPFGMLCRGIREDPTRIRAMGASPTIALLKMYVISGAVAGVGGALNAVSTQVVGLDSLS 254

Query: 259 PLLSTQVILWVAVGGRGTLLGPACAAVVLTRLQQEVSSYSTSFWPLIAGSLFLTLILFAP 318
             LS + ++ + +GG G+L G     +V    +  VS+ +   W  + G+L + ++LFAP
Sbjct: 255 FTLSAESLVMLVLGGTGSLFGALTGTIVFMFFEDLVSTANPFHWLTMVGALLIAVVLFAP 314

Query: 319 EGAPGLLRRAKA 330
           +G  G +    A
Sbjct: 315 KGLYGTVAEVLA 326