Pairwise Alignments

Query, 509 a.a., Long-chain-fatty-acid--CoA ligase from Xanthobacter sp. DMC5

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  224 bits (571), Expect = 6e-63
 Identities = 151/493 (30%), Positives = 239/493 (48%), Gaps = 37/493 (7%)

Query: 42  LANLLVARGVKPGDRVAVQVEKSWPALALYLATIRAGAVYLPLNTAYTLNEVEYFLSDAE 101
           LA  L+  G+K GD + +        L    AT + G V + +NTAY  +E+ Y +  ++
Sbjct: 46  LAKGLLEIGIKKGDHIGIWARNVPDWLTFMFATAKIGVVLVTVNTAYKSHELAYVMKQSD 105

Query: 102 ----------------PAVFVCRPEIEQDARA---------LAARLGVGAVETLGTDGKG 136
                             ++   PE++   R          L   + VG  +  G     
Sbjct: 106 MKALAIIDSFRDVNYLEILYELVPELKTSQRGKLNSEEFPYLKNVIYVGQEKHRGMYNTT 165

Query: 137 SLTDAAAAFPDT-FEDVARG--AEDLGGILYTSGTTGRAKGAMLTHANLLSNAQTLKDYW 193
            L        D    +  +G  ++D+  + YTSGTTG  KG MLTH N+L+N   + +  
Sbjct: 166 ELMLLGNYVSDEKLIEAKKGLDSDDVINMQYTSGTTGFPKGVMLTHKNILNNGYYIGEKQ 225

Query: 194 RFTADDVLLHALPIFHTHGLFVASNIVLLAGASMEFRSKFDPKEAVALMSAGKVTTLMGV 253
           +FT ++ L   +P+FH  G+ +    +L  G ++     FDP   +A +   K T + GV
Sbjct: 226 KFTEEERLCLPVPLFHCFGIVLGVLALLTHGGTLVMLEIFDPLLVLAAIQKEKCTAVYGV 285

Query: 254 PTFYTRLLDQPGLTREATKGMRLFI-SGSAPLLAETHRAFEERTGHAILERYGMTE---- 308
           PT +      P         +R  I +GS   +    +   +     I   YG+TE    
Sbjct: 286 PTMFIAEFSHPMFEMFDLSSLRTGIMAGSTCPIEAMKKVMSDMYMREITISYGLTEASPV 345

Query: 309 -TCMNTSNPYDGARIAGTVGYPLPGISVRVTDPETGAVLPTGEIGMIEVQGPNVFKGYWR 367
            T  +  +P++  +   +VG  +P   V++ DPETG  L  G +G I  +G NV KGY++
Sbjct: 346 FTMTSVDDPFE--KRVESVGKAMPHCEVKIIDPETGETLAPGNVGEICCRGYNVMKGYYK 403

Query: 368 MPEKTAAEF-RDGFFITGDLGKIDENGYVHIVGRGKDLVITGGFNVYPKEVEGEIDAIPG 426
           MPEKTA    +DG+  +GDL   DE+GY  IVGR KD++I GG N+YP+E+E  +  +PG
Sbjct: 404 MPEKTAEVIEKDGWLHSGDLAVEDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPG 463

Query: 427 VVESAVIGVPHPDFGEGVTAVIVAQKDATLTEEAVHRALENRLAKFKQPKRVFFVSELPR 486
           + ++ V+G+P   +GE V A ++ ++   + EE V      ++A++K PK VF V E P 
Sbjct: 464 INDAQVVGIPDEKYGEIVGAFVIPKEGYEIKEEDVRDFALEKIARYKVPKHVFVVEEFPM 523

Query: 487 NTMGKVQKNILRE 499
              GK+QK  L E
Sbjct: 524 TASGKIQKFKLTE 536