Pairwise Alignments

Query, 450 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Xanthobacter sp. DMC5

Subject, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  206 bits (525), Expect = 9e-58
 Identities = 124/450 (27%), Positives = 240/450 (53%), Gaps = 27/450 (6%)

Query: 5   LVGLLYGGATLGTMFLGMPIAFALGAVAVLFMVGFMPAASLDTVTQNVYEEMASITLLSI 64
           +VG ++G   LG +F GMP+ F+L  VA+ F++    +  ++   Q +   + + TLL++
Sbjct: 1   MVGSIFGW--LGLLFAGMPVGFSLIFVALAFLI-LTNSTGINFAAQQMLGGIDNFTLLAV 57

Query: 65  PLFILKGAAIGKSRAGQDLYSALHAWMHKIPGGLGIANVFACALFAAMAGSSPATCSAIG 124
           P F+L G  +  +   + +++   + +  I G LG  N+ A  LF+ M+GS+ A    +G
Sbjct: 58  PFFVLTGHLMNSAGITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLG 117

Query: 125 SAGIPEMRKRGYSGAFAAGLIAAGGTLGILLPPSITMILYAVAAEQSLGRLFLAGLGPGL 184
              I  MR   Y   FA GL AA   +G L+PPS+ +++Y V +  S+G LFLAG  PGL
Sbjct: 118 QLEIKSMRDAKYHDDFAGGLTAASCIIGPLVPPSVPLVIYGVVSNTSIGALFLAGAIPGL 177

Query: 185 L--LVMLFAGYAMVRFRQEYAAAKKAYAETGARSALLHEENLTLRDRFAALPRVLPFVVL 242
           L  + ++   Y + + ++ Y    KA                + R++F +L     F+ L
Sbjct: 178 LCCIALMVMSYFICK-KRGYMTLPKA----------------SRREQFKSLKEA--FLSL 218

Query: 243 LTGVMV--ALYGGYATPSETAGLGGVLALALIALIYGVWTPKDLSPILTSTIRESTMLMM 300
           LT V++   ++ G  TP+E A +  + AL L  ++Y   T +    IL  T+  + ++ +
Sbjct: 219 LTPVIIIGGIFSGKFTPTEAAAVSSLYALFLGTVVYNTLTLQGFIEILKETVNTTAVVAL 278

Query: 301 IIGMSLLYSYVMSYLHISQAAAQAIVALNLSKWLLLATILVLVVVLGFFLPPVSIILMTA 360
           ++    ++ ++++   + Q  A   + ++ +  +LL  I +L++ LG F+  ++++L+  
Sbjct: 279 MVMGVTVFGWIVAREQLPQMLADYFLTISDNPLVLLLLINLLLLFLGTFIESLALLLLLV 338

Query: 361 PIILPPLKAAGFDLIWFGVVMTIVMEMGLIHPPVGLNIFVIKNIAPDIPLKDVIWGTVPF 420
           P ++P   A G D + FGV+  + + +G++ PP+G+ ++V+  +  DIP   +  G +P 
Sbjct: 339 PFLVPVASAVGIDPVHFGVMAILNLMIGILTPPMGMALYVVSRVG-DIPFHTLTRGVLPL 397

Query: 421 VLLMLLAVILLCLFPQIATGFPDLVMGKGR 450
           ++ + + + L+ +FPQ     P+L +G G+
Sbjct: 398 LVPLFIVLALVAVFPQFTLLLPELFLGYGQ 427