Pairwise Alignments

Query, 450 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Xanthobacter sp. DMC5

Subject, 425 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  189 bits (480), Expect = 1e-52
 Identities = 122/441 (27%), Positives = 220/441 (49%), Gaps = 19/441 (4%)

Query: 6   VGLLYGGATLGTMFLGMPIAFALGAVAVLFMVGFMPAASLDTVTQNVYEEMASITLLSIP 65
           +G L   A LG   LG P+ +A+   ++L+++  +       + Q +   + S  L+++P
Sbjct: 1   MGFLVVAAFLGLFMLGFPVVYAILLPSILYVL--VEGLPFGLLAQRITYALDSFPLVAVP 58

Query: 66  LFILKGAAIGKSRAGQDLYSALHAWMHKIPGGLGIANVFACALFAAMAGSSPATCSAIGS 125
           LFI  G  +  S     ++   +  + ++PGGL   NVF   +F+ M+G++ A    +G 
Sbjct: 59  LFIFVGNLMNLSGITDRIFRFAYTLVGRMPGGLAQVNVFGSLIFSGMSGAALADIGGLGR 118

Query: 126 AGIPEMRKRGYSGAFAAGLIAAGGTLGILLPPSITMILYAVAAEQSLGRLFLAGLGPGLL 185
             I  M+KRG+  +FA  + AA  TLG + PPSI +I+Y      S+ +L +AG+ P +L
Sbjct: 119 IEIDAMKKRGFDPSFAGAVTAASATLGPIFPPSIPLIVYGSVTSVSIVQLLVAGIMPAVL 178

Query: 186 -LVMLFAGYAMVRFRQEYAAAKKAYAETGARSALLHEENLTLRDRFAALPRVLPFVVLLT 244
              +L     +V  R  +A A++ +   G     L            ALP +L    L+ 
Sbjct: 179 CTALLMLTVLIVAIRHGHARAER-WPTAGELVGTL----------VPALPAILA-PALMV 226

Query: 245 GVMVALYGGYATPSETAGLGGVLALALIALIYGVWTPKDLSPILTSTIRESTMLMMIIGM 304
           G M A   G  TP+E A +  V  + +  ++Y   TP  L      T R S+ +++I+  
Sbjct: 227 GGMTA---GAFTPTEAAAITAVYVIFISGVLYRELTPAHLWHSAVLTARSSSAILIIVAS 283

Query: 305 SLLYSYVMSYLHISQAAAQAIVALNLSKWLLLATILVLVVVLGFFLPPVSIILMTAPIIL 364
           + L+ ++++   + Q  A A++  +    +LL    ++  V G FL   +  L+  PII 
Sbjct: 284 AALFGWILAVEQVPQTFAAALLGWSKDPLMLLIIANLIFFVAGMFLDSTTATLLLVPIIA 343

Query: 365 PPLKAAGFDLIWFGVVMTIVMEMGLIHPPVGLNIFVIKNIAPDIPLKDVIWGTVPFVLLM 424
           PPL  AG D +  G+V    + +GL+ PP+GL++F++ +IA  + ++ ++   VPF + +
Sbjct: 344 PPLVMAGVDPVQLGIVTIFNLMLGLLTPPMGLSLFLVSDIA-KVSIRQLLRALVPFYIPL 402

Query: 425 LLAVILLCLFPQIATGFPDLV 445
           +  +++L L        P L+
Sbjct: 403 VSTLVILTLAKDFTLWLPRLI 423