Pairwise Alignments

Query, 926 a.a., Protein translocase subunit SecA from Xanthobacter sp. DMC5

Subject, 903 a.a., protein translocase subunit SecA from Vibrio cholerae E7946 ATCC 55056

 Score =  901 bits (2329), Expect = 0.0
 Identities = 493/939 (52%), Positives = 635/939 (67%), Gaps = 53/939 (5%)

Query: 1   MFGGLARKLFGSANDRRVKGYRPRVQAINALEKELEALSDDQLRARTEDFRRQLAEGQVT 60
           M   L  K+ GS NDR ++  R  V+ IN  E   EALSD++L+A+T +FR+++ +G+  
Sbjct: 1   MITKLLTKVIGSRNDRTLRRLRKIVKEINNYEPAFEALSDEELKAKTVEFRQRIEQGE-N 59

Query: 61  LDDLLVPAFATVREGAKRALGMRHFDVQLIGGMVLHESSIAEMKTGEGKTLVATLPVYLN 120
           LD LL  AFATVRE +KR  GMRHFDVQLIGGMVLH   IAEM+TGEGKTL ATL  YLN
Sbjct: 60  LDQLLPEAFATVREASKRVFGMRHFDVQLIGGMVLHGGQIAEMRTGEGKTLTATLAAYLN 119

Query: 121 ALAGKGVHVVTVNDYLAKRDAEWMGKLYRFLGLTTGIIVHGLDDDERRAAYASDVTYATN 180
           AL GKGVH+VTVNDYLAKRDAE    L+ FLG+T G+ +  +    ++ AY +D+ Y TN
Sbjct: 120 ALPGKGVHIVTVNDYLAKRDAETNRPLFEFLGMTVGVNIPNMPQPAKKEAYQADILYGTN 179

Query: 181 NELGFDYLRDNMKYERAHMVQRPHFYAIVDEVDSILIDEARTPLIISGPLDDRSDFYNTI 240
           NE GFDYLRDNM +     VQR  F+A+VDEVDSILIDEARTPLIISGP +D SD Y  I
Sbjct: 180 NEFGFDYLRDNMAFRPEDRVQRARFFAVVDEVDSILIDEARTPLIISGPAEDSSDLYIRI 239

Query: 241 DQYIPRLSKEDYE------------VDEKQRTVSMTEAGMEKMEQMLTEAGLL-KSESLY 287
           ++ IP L K+D E            VDEK + V +TE G E +E++L + G++ + ++LY
Sbjct: 240 NKLIPLLQKQDKEDSEEYRGDGHFTVDEKSKQVHLTETGQEFVEELLVKNGMMQEGDTLY 299

Query: 288 DIENVSVVHHVNQALRAHSLFQRDKDYIVRND-EVVIIDEFTGRMMPGRRYSEGLHQALE 346
              N+S++HHVN ALRAH LF+++ DYIV  D EVVI+DE TGR MPGRR+S+GLHQA+E
Sbjct: 300 SPANISLLHHVNAALRAHVLFEKNVDYIVTPDGEVVIVDEHTGRTMPGRRWSDGLHQAVE 359

Query: 347 AKERVQVQPENQTLASITFQNYFRLYEKLAGMTGTAATEAAEFQDIYKLEVVEVPTNVPV 406
           AKE V++Q ENQTLASITFQNYFRLYEKL+GMTGTA TEA EFQ IY LE V +PTN P+
Sbjct: 360 AKEGVKIQNENQTLASITFQNYFRLYEKLSGMTGTADTEAFEFQQIYGLETVVIPTNKPM 419

Query: 407 SRIDDDDEVYRSAGEKYAAIIELIKECSARGQPVLVGTTSIEKSELLAELLKQGGFHQID 466
            R D  D VYRS  EK+AAIIE IK+   +GQPVLVGT SIEKSELL+  LK+ G     
Sbjct: 420 VRNDMPDVVYRSEAEKFAAIIEDIKQRVEKGQPVLVGTVSIEKSELLSNALKKAGIKH-- 477

Query: 467 FSDPAAFAHDRSGKAFAVLNARYHEQEAYIVSQAGVPGAITIATNMAGRGTDIKLGGAAD 526
                            VLNA++HE+EA IV++AG PGA+TIATNMAGRGTDI LGG+  
Sbjct: 478 ----------------NVLNAKFHEKEAEIVAEAGKPGAVTIATNMAGRGTDIVLGGSWQ 521

Query: 527 MRIAAELKDMPEGEQRTAAETRIRAEVEELKQKALGAGGLFVLGTERHESRRIDNQLRGR 586
            ++  E  D P  EQ  A    I+AE +++  + L AGGL ++GTERHESRRIDNQLRGR
Sbjct: 522 AKV--EKLDNPTQEQIDA----IKAEWKQVHDQVLQAGGLHIIGTERHESRRIDNQLRGR 575

Query: 587 SGRQGDPGHSKFFLSLDDDLMRIFGSDRLDGMLQRLGLKEGEAIIHPWINKALEKAQQKV 646
           SGRQGD G S+F+LS++D L+RIF SDR+  ++Q  G+ EGEAI    +++++EKAQ+KV
Sbjct: 576 SGRQGDAGSSRFYLSMEDTLLRIFTSDRMAALIQS-GMDEGEAIESKMLSRSIEKAQRKV 634

Query: 647 EARNYDMRKNVLKYDDVLNDQRKVVFEQRLELMNDDDVAETVEDMRHALITETVAKFIPE 706
           E RN+D+RK +L+YDDV NDQRKVV+E R ELM+ DD+++ +   R  ++   + ++IP 
Sbjct: 635 EGRNFDIRKQLLEYDDVANDQRKVVYELRDELMSADDISDMIAQNREDVLNAVMDEYIPP 694

Query: 707 NAYPEQWDVDGLDAAIKEVLGIELPVKDWAKEEGIAGPE-VTERVIRRADEWMAAKTAQY 765
            +  + WD+ GL+  +K    + LP++ W   +     E + ER+I +A E   AK    
Sbjct: 695 QSLEDMWDIKGLEDRLKNDFDLPLPIQSWLDADNKLYEEALRERIIEQAVEVYKAKEQAV 754

Query: 766 GPDIMRYVEKSILLQTLDHLWREHIAMLDHLRQVVGLRGYAQRDPLNEYKSEAFNLFSAL 825
            P +MR  EKS++LQTLD LW+EH+A +DHLRQ + LRGYAQ++P  EYK E+F LF  L
Sbjct: 755 SPAVMRNFEKSVMLQTLDTLWKEHLAAMDHLRQGIHLRGYAQKNPKQEYKRESFELFEDL 814

Query: 826 LNRLREVVTAQLMRVEIVAQPPMEEELPTMEAHHADPFTGEDEMSFAGAALGSRPEPLLS 885
           L  L+  V   L +V +  Q    EE+  MEA        +       AA  ++ +   +
Sbjct: 815 LESLKSDVITVLSKVRVQQQ----EEVERMEA--------QRRAQAEEAARHAQAQHASA 862

Query: 886 GDVAVIERNPNDPSTWGKVGRNEACPCGSGKKYKHCHGR 924
            D    E N        KVGRNE CPCGSGKKYK CHG+
Sbjct: 863 DDAEQDESNQPMVRDERKVGRNEPCPCGSGKKYKQCHGQ 901