Pairwise Alignments

Query, 426 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Xanthobacter sp. DMC5

Subject, 427 a.a., TRAP dicarboxylate transporter, DctM subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  259 bits (662), Expect = 1e-73
 Identities = 156/428 (36%), Positives = 238/428 (55%), Gaps = 9/428 (2%)

Query: 1   MAITILFGVFSLLLLVGTPVAFCLGLASLATVLYLDLPPVVVFQQLNSGMNAFSMLAIPF 60
           MA   LF VF  L L+G P+A  LGLA    +L   L  + V   + +G+  + +LAIP 
Sbjct: 1   MATLSLFAVFLGLTLLGAPLAVALGLAGSVAILEAQLGILSVPTTVYAGIAKYPLLAIPV 60

Query: 61  FIFAGDLMMRGGIADRLIGMAASLVGHLRGGLGQVNVVASTLFGGISGSAVADASAIGGI 120
           FI AG +  R G+A +L+  A+S+VG   GGL  V V+   + GGISGS  ADA+A+  +
Sbjct: 61  FILAGLIFERVGVARQLVSFASSIVGARNGGLAIVAVLVCMVMGGISGSGPADAAAVATV 120

Query: 121 MIPQMARHGYAKDYAVNVTVNSAIIALMIPPSHNMIIYSLSAGGTISIADLFTAGIMPGL 180
           MIP + + GY K ++ +V    A  A++IPPS   IIYS+      S+  LF  G++PGL
Sbjct: 121 MIPSLHKAGYPKAFSASVIAAGAATAILIPPSVAFIIYSVLVPQA-SVPALFAGGLIPGL 179

Query: 181 LLAAAMMITAYVVARNRGY---PAGTFPGWHAVLRSVVAAIPGIMLIGIIFGGVRSGIFT 237
           L   +++     ++R  G+    +G  PG+   L+    AI G++   II GG+R G+FT
Sbjct: 180 LAGLSLLAPIVYLSRRHGFGMADSGPRPGFWVSLKG---AIWGLLAPVIILGGLRLGLFT 236

Query: 238 ATESSCIAVIYALLVTTLVYREMHWADFVEATLGAVRTTAMVLLVIGTAASFGWLMAFLQ 297
            TE++ +AV Y L V   + R +     ++    A   + +VLL+I  A+ F W  + L 
Sbjct: 237 PTEAAVVAVFYGLFVGVFILRTLSGRMLIDMLADAAEMSGVVLLIIALASVFAWAGSTLG 296

Query: 298 VPKATIEMMQAISSNPYVILLLINIILLILGTFMDMAPMIIICTPIFLPLVKAFGIDPVH 357
              A        + N  V+LL++N++LL LG  +D   + +I  P+ +P ++AF  DPV 
Sbjct: 297 AFDAVAGAALQATDNEVVVLLMLNLLLLGLGMVLDAVSIFLILLPLLVPFMEAFHWDPVW 356

Query: 358 FGVILILNAGIGLNTPPVGSVLFVGCAVGKITIGEAMK-TIWPFFGASIAVLMIVTYVPA 416
           FGV++ +N  +G  TPP+   L V   +  + +  A   T+W F GA I  LM+VT+VP 
Sbjct: 357 FGVMVTMNLAVGQFTPPMAVNLMVTTRIAGVRMEAATGWTLW-FVGAMIVALMVVTFVPE 415

Query: 417 VSLWLPAA 424
           ++LWLP A
Sbjct: 416 LTLWLPRA 423