Pairwise Alignments

Query, 228 a.a., Outer membrane protein W from Xanthobacter sp. DMC5

Subject, 217 a.a., outer membrane protein W from Vibrio cholerae E7946 ATCC 55056

 Score =  109 bits (273), Expect = 4e-29
 Identities = 72/219 (32%), Positives = 107/219 (48%), Gaps = 14/219 (6%)

Query: 18  VAGSATAADLSTPVYKAPAVEEPLSPWQIRVRALYVVPEAGGSVTGIPGSDLSISNSVVP 77
           + G A  A LS+    AP        + +R     VVP           S+L+++++   
Sbjct: 5   ICGLAVLAALSS----APVFAHQEGDFIVRAGIASVVPNDSSDKVLNTQSELAVNSNTQL 60

Query: 78  ELDITYYFTKNIAAELILGVTP--HDIN-GAGTITSLGQVGKVWLLPPTLTLQYHFTDFG 134
            L + Y FT NI+ E +L  TP  H I+   G + SLG +G+   LPPT  +QY+F +  
Sbjct: 61  GLTLGYMFTDNISFE-VLAATPFSHKISTSGGELGSLGDIGETKHLPPTFMVQYYFGEAN 119

Query: 135 P-FKPYIGAGVNYTAFFSQD----ATNPAFSSLKVQDAWGFALQAGFDWMIDRHWGFNVD 189
             F+PY+GAG+NYT FF +      TN   S LK+ D+WG A   GFD+M++  W  N  
Sbjct: 120 STFRPYVGAGLNYTTFFDESFNGTGTNAGLSDLKLDDSWGLAANVGFDYMLNDSWFLNAS 179

Query: 190 VKKIFLQPDFLLQTVGGAYLQGSAQINPWIFGTGVTYRF 228
           V    ++     +  G        +INPW+F     Y+F
Sbjct: 180 VWYANIETTATYK-AGADAKSTDVEINPWVFMIAGGYKF 217