Pairwise Alignments

Query, 634 a.a., Acetoin dehydrogenase operon transcriptional activator AcoR from Xanthobacter sp. DMC5

Subject, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  214 bits (546), Expect = 5e-60
 Identities = 135/345 (39%), Positives = 183/345 (53%), Gaps = 24/345 (6%)

Query: 298 VVVLHAARRPKPAPRDTSQRDPGRELEPLAFDAIIGESAIMQEVKAKARRMAESGLPILL 357
           V V +A R+      D   ++         +   IG S  MQ V       A S   I +
Sbjct: 106 VTVNNAIRKASKLKNDVDNKNQN-------YQGFIGSSQTMQAVYRTIDSAASSKASIFI 158

Query: 358 EGETGVGKEVFARAIHGARAPAG-PFVPLNCGGLPRDLIASELFGYEKGAFTGADTSGKQ 416
            GE+G GKEV A AIH A      PF+ +NC  +P+DLI SELFG+ KGAFTGA T  +Q
Sbjct: 159 TGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATE-RQ 217

Query: 417 GKVEAADGGLLCLDEIGEMPLELQSYLLRVLEDGVVYRVGGHTGRRVDLRLVSMTNRDLT 476
           G  EAADGG L LDE+ EM L+LQ+ LLR ++ G   +VG    + VD+R V  TNRD  
Sbjct: 218 GAAEAADGGTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPW 277

Query: 477 GEVAAGRFRKDLFYRIAALRLRIPPLRERGEDVLLLLDHIGRSAAARAGLPAPRFTEAAR 536
            EV  GRFR+DL+YR+  + L +PPLR RG+DV+ +   +    +   G    R +    
Sbjct: 278 KEVQEGRFREDLYYRLYVIPLHLPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVV 337

Query: 537 AALAAYSWPGNVRELRNVVEMLIAMGSADAPIDGSDLPPEIATAAA----AAPAATD--- 589
                Y WPGNVR+L+NV+  ++ +      I    LPP +   +A    A P A +   
Sbjct: 338 ERFRQYEWPGNVRQLQNVLRNVVVLNEG-REITLDMLPPPLNQMSAPINRALPLAHENKV 396

Query: 590 -------LRTVEEAAIRAAVEACGGNLTRAARRLGIARSTLYMRL 627
                  L   E+ AI  A+EAC GN+ RAA  L ++ ST+Y +L
Sbjct: 397 SVHEIFPLWMTEKQAIEQAIEACDGNIPRAATYLDVSPSTIYRKL 441