Pairwise Alignments

Query, 300 a.a., Non-homologous end joining protein Ku from Xanthobacter sp. DMC5

Subject, 268 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  158 bits (400), Expect = 1e-43
 Identities = 89/267 (33%), Positives = 143/267 (53%), Gaps = 13/267 (4%)

Query: 1   MAPRASWKGFLTVGALSCAVGLYAAASTSERISLHMLSRKSGHRLRRQYVDEETGKPVET 60
           MA R  WKG+L +  ++C V +  A S SE++  H L+R++ +R+   YVD  TGK V+ 
Sbjct: 1   MALRPYWKGYLKLSLVTCPVQMMPATSESEKVRFHTLNRQTQNRVVSHYVDSVTGKEVKE 60

Query: 61  EDQVRGYEVSKGEYITIEPEEAAAVLPDNDKTISIDAFLPCDGIDTVYLDRPYFLAPVDE 120
           ED+V+GY+  + EY+ +E EE   V  ++ KTI I  F P D I+ ++LD PY L+P D 
Sbjct: 61  EDEVKGYQRGEHEYVILEDEELENVALESTKTIDISTFTPRDSIEWIWLDTPYCLSPNDP 120

Query: 121 AAAEVFDLLKRGMAAQKVAALGEALLFRRVRKLLIRPSGESGALLASTLSFDYEVRSAEE 180
              E F +++  M AQ +  +   ++ RR R +++ P G+   ++  TL +  EVR  + 
Sbjct: 121 VGQEAFSVIRDAMEAQNMVGISRLVISRRERAVMLEPRGK--GIVLWTLRYGDEVRDEDS 178

Query: 181 AFAEVPDVKITGEMRELATHIIKTKAGKFDPEAYQDRYETALAELVRA--------KMEG 232
            F  + D +   EM  L   +IK +   + P+   D  +  L E++ A        K +G
Sbjct: 179 YFEAIGDEQADSEMMPLVQQLIKKQTKDWTPKMVADPVQERLLEIIAAKKKALKPQKAQG 238

Query: 233 KPLPKAAPRKEEKVVDLLAALRASAKA 259
           K  P ++P     VV ++ ALR S  A
Sbjct: 239 KTAPSSSP---SNVVSIMDALRKSVAA 262