Pairwise Alignments

Query, 300 a.a., Non-homologous end joining protein Ku from Xanthobacter sp. DMC5

Subject, 272 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  168 bits (426), Expect = 1e-46
 Identities = 92/268 (34%), Positives = 154/268 (57%), Gaps = 10/268 (3%)

Query: 3   PRASWKGFLTVGALSCAVGLYAAASTSERISLHMLSRKSGHRLRRQYVDEETGKPVETED 62
           PR  WKG+L +  ++C V +  A S SE++  H L+RKS +R+  +YVD  TGK V+ +D
Sbjct: 4   PRPYWKGYLKLSLVTCPVSMMPATSESEKVRFHTLNRKSNNRVVSRYVDAVTGKEVDEDD 63

Query: 63  QVRGYEVSKGEYITIEPEEAAAVLPDNDKTISIDAFLPCDGIDTVYLDRPYFLAPVDEAA 122
           +V+GYE  + +++ IE EE  +V  ++ +TI I+ F+P D I+ ++L++P++L P DE  
Sbjct: 64  EVKGYERGENDFLVIEDEELESVALESARTIDIEKFVPRDTIEWIWLEKPHYLTPSDEVG 123

Query: 123 AEVFDLLKRGMAAQKVAALGEALLFRRVRKLLIRPSGESGALLASTLSFDYEVRSAEEAF 182
            E F +++  M A+KVA +   ++ RR R +++ P G+   ++  TL +  EVR  E  F
Sbjct: 124 HEAFSVIRDAMVAEKVAGISRLVIGRRERAVMLEPCGK--GIVVWTLRYGDEVRKPENYF 181

Query: 183 AEVPDVKITGEMRELATHIIKTKAGKFDPEAYQDRYETALAELVR-----AKMEGKPLPK 237
           A++ D     ++  L T +I+ ++  ++P    D  +  L E++      AK   KP  K
Sbjct: 182 ADIGDGDNDPKLMSLVTSLIEERSKPWNPNMVSDPVQEKLLEIIESKRKSAKKVAKPKAK 241

Query: 238 -AAPRKEEKVVDLLAALRAS--AKASGG 262
              P     V+DL+AAL+ S   K  GG
Sbjct: 242 EGEPVHAGNVIDLMAALKGSLEKKKPGG 269