Pairwise Alignments

Query, 300 a.a., Non-homologous end joining protein Ku from Xanthobacter sp. DMC5

Subject, 294 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  296 bits (758), Expect = 4e-85
 Identities = 148/298 (49%), Positives = 208/298 (69%), Gaps = 8/298 (2%)

Query: 1   MAPRASWKGFLTVGALSCAVGLYAAASTSERISLHMLSRKSGHRLRRQYVDEETGKPVET 60
           ++ RA WKG+L  G ++  V LY A STS+RI+ H ++R++G+R+RR+++D  +GKPVE 
Sbjct: 3   VSARAQWKGYLRFGEVTAPVALYTATSTSDRIAFHTVNRETGNRVRREFIDSVSGKPVEK 62

Query: 61  EDQVRGYEVSKGEYITIEPEEAAAVLPDNDKTISIDAFLPCDGIDTVYLDRPYFLAPVDE 120
           EDQV+GYE+    Y+ +EPEE A+ +P++DKT+ + AF+PCD ++ VY D+PY+L P D+
Sbjct: 63  EDQVKGYEIGDERYVVLEPEEVASAVPESDKTLRVQAFIPCDEVEKVYFDKPYYLTP-DK 121

Query: 121 AAAEVFDLLKRGMAAQKVAALGEALLFRRVRKLLIRPSGESGALLASTLSFDYEVRSAEE 180
              + F LL+ GM  +KVAA+ + +LFRR+R +L+RP  +   L+A+TL+FDYEVRSA+E
Sbjct: 122 MGTDAFALLREGMRKKKVAAIAQTVLFRRMRTILLRPHDK--GLIATTLNFDYEVRSAKE 179

Query: 181 AFAEVPDVKITGEMRELATHIIKTKAGKFDPEAYQDRYETALAELVRAKMEGKPLPKAAP 240
           AF E+PD+KI GEM +LA HII  K G F  E + DRYE ALA+L++AK+EGK LPK AP
Sbjct: 180 AFKEIPDIKIEGEMLDLAKHIIGMKKGTFSAEEFDDRYEAALADLIKAKLEGKSLPKRAP 239

Query: 241 RKEEKVVDLLAALRASAKASGGDGAGKKASAK--AGKAAAKVPAKKPTARPATARKST 296
            K  K  DLL ALR SA       A KK + K  A K  AK  AK   + PA  R+++
Sbjct: 240 PKVSKANDLLEALRQSAGMKKPPAASKKRAGKESAAKTKAKTAAK---SAPAQRRRAS 294