Pairwise Alignments

Query, 300 a.a., Non-homologous end joining protein Ku from Xanthobacter sp. DMC5

Subject, 294 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score =  182 bits (462), Expect = 8e-51
 Identities = 113/298 (37%), Positives = 168/298 (56%), Gaps = 7/298 (2%)

Query: 1   MAPRASWKGFLTVGALSCAVGLYAAASTSERISLHMLSRKSGHRLRRQYVDEETGKPVET 60
           MAPRASWKG++ +  +SC V LY A S SERIS + L + + +R+  + VD E G  VE 
Sbjct: 1   MAPRASWKGYIRLSLVSCPVRLYPATSASERISFNQLHKDTHNRINMKPVDPELGL-VER 59

Query: 61  EDQVRGYEVSKGEYITIEPEEAAAVLPDNDKTISIDAFLPCDGIDTVYLDRPYFLAPVDE 120
            D V+GYE    +YI IE  +  +V  +++ T++I+AF+    +D +Y D PY+LAP   
Sbjct: 60  SDLVKGYEYEDKKYIIIEDSDLESVRIESNHTMNIEAFVDAGSVDVIYQDAPYYLAPDGA 119

Query: 121 AAAEVFDLLKRGMAAQKVAALGEALLFRRVRKLLIRPSGESGALLASTLSFDYEVRSAEE 180
            A E F +L+  +      A+   +L  R R + I P  E+G +   TL    EVR   +
Sbjct: 120 MAEETFVVLREALRRSGKLAIARLVLSSRERVVTIGPR-ETG-MFVCTLRNPNEVRGTAD 177

Query: 181 AFAEVPDVKITGEMRELATHIIKTKAGKFDPEAYQDRYETALAELVRAKMEG-KPLPKAA 239
            F  +P  K   EM +LA  +I+ K   FDP+ Y+DRYE AL +++R K++G KP+   A
Sbjct: 178 YFGNIPVGKPDPEMLQLAEALIEQKTTTFDPKQYEDRYEVALMQMIREKLKGHKPIIAQA 237

Query: 240 PRKEEKVVDLLAALRASAKASGGDGAGKKASAKAGK--AAAKVPAKKPTARPATARKS 295
           P +   VV+L+ AL+AS   +      K  +  A K  AA    AK+ TA+PA  +K+
Sbjct: 238 PER-GNVVNLMDALKASLSQAKPPARSKPKAEPAAKEPAAKAAAAKRVTAKPAAKKKA 294