Pairwise Alignments

Query, 272 a.a., Exodeoxyribonuclease III from Xanthobacter sp. DMC5

Subject, 257 a.a., exodeoxyribonuclease III protein from Sinorhizobium meliloti 1021

 Score =  112 bits (280), Expect = 8e-30
 Identities = 81/268 (30%), Positives = 121/268 (45%), Gaps = 20/268 (7%)

Query: 3   LTVCTWNINSVRIRLDIVRAALERLRPDVLCLQETKCQDDKFPLNAIRDMGFPHIALNGQ 62
           + + T+NIN V  RLDI+   L    PDV+CLQE K  D +FP  AI   G+  +   GQ
Sbjct: 1   MKIATFNINGVNKRLDILLTWLGTAEPDVVCLQELKATDGQFPRAAIEAAGYGAV-WRGQ 59

Query: 63  KGWHGVATFSKRPFAHIEKGEFCGKG---DARHIAVTLDGAHALGKPLTIHNFYVPAGGD 119
             W+GVA  ++     + +    G      +R+I   ++G       + I + Y P G  
Sbjct: 60  AAWNGVAILARDREPVLTRTGLPGDSSDTQSRYIEAAVNG-------ILIASLYAPNGNP 112

Query: 120 VPDPELNPKFAHKLAFLDEITSWPPLKPDAGNGDHAIVVGDLNIAPLETDVWSHKQLLTV 179
            P P+ + K A  L F     +          G   ++ GD N+ P   D++  +     
Sbjct: 113 QPGPKFDYKLAWHLRFNQHAAAL------LETGVPVVLAGDYNVVPEPRDIYPTRSYDDN 166

Query: 180 VSHTPVEVERLGALQASGPWVDVMRRFVPPQEKLFTWWSYRSPDYTANDRGRRLDHVWAS 239
               P       +L   G W+D +R+ + P+E+LFT+W YR   +   D G RLDH+  S
Sbjct: 167 ALVQPESRAAFRSLVDQG-WLDALRK-IHPKEELFTFWDYRRNRW-QRDAGLRLDHILLS 223

Query: 240 ESLAPSATAMTVLKEARGWEKPSDHVPV 267
             L    T   + +E R  E  SDH PV
Sbjct: 224 RKLRRRLTGAGIDREIRALEGSSDHAPV 251