Pairwise Alignments

Query, 272 a.a., Exodeoxyribonuclease III from Xanthobacter sp. DMC5

Subject, 249 a.a., exodeoxyribonuclease III from Methanococcus maripaludis S2

 Score = 72.0 bits (175), Expect = 1e-17
 Identities = 77/275 (28%), Positives = 120/275 (43%), Gaps = 33/275 (12%)

Query: 3   LTVCTWNINSVRIRL-DIVRAALERLRPDVLCLQETKCQDDKFPLNAIRDMGFPHIALNG 61
           + + +WN+N +R  L +     LER  PD++C+QETK Q  +  L    D  F +     
Sbjct: 1   MKMLSWNVNGIRACLKNGFMNFLERESPDIMCIQETKVQSGQVQLGL--DGYFQYWNYAE 58

Query: 62  QKGWHGVATFSK----RPFAHIEKGEFCGKGDARHIAVTLDGAHALGKPLTIHNFYVP-A 116
           +KG+ G A F+K         +E  E   +G  R I +  D  + +       N Y P +
Sbjct: 59  RKGYSGTAIFTKIKPNNVILGMENSEHNNEG--RVITLEFDEYYLV-------NVYTPNS 109

Query: 117 GGDVPDPELNPKFAHKLAFLDEITSWPPLKPDAGNGDHAIVVGDLNIAPLETDVWSHKQL 176
              +   E   K+     FL  I +    KP        +  GDLN+A  E D+ + K  
Sbjct: 110 QRGLTRLEYRQKWDED--FLSYIKTLETKKP-------VVFCGDLNVAHKEIDLKNPKTN 160

Query: 177 LTVVSHTPVEVERLGALQASGPWVDVMRRFVPPQEKLFTWWSYRSPDYTANDRGRRLDHV 236
           +     TP E      +  SG ++D  R F    +  ++WWSYR  +  A + G R+D+ 
Sbjct: 161 VKNAGFTPEERNGFDNIVNSG-FLDTFREFNNEPDN-YSWWSYRF-NARARNIGWRIDYF 217

Query: 237 WASESLAPSATAMTVLKEARGWEKPSDHVPVAMTF 271
             S+SL  +     ++ E  G    SDH PV + F
Sbjct: 218 CISKSLRNNLKDAYIMPEVMG----SDHCPVGIIF 248