Pairwise Alignments

Query, 500 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 316 a.a., D-alanyl-D-alanine endopeptidase from Vibrio cholerae E7946 ATCC 55056

 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 77/264 (29%), Positives = 113/264 (42%), Gaps = 28/264 (10%)

Query: 78  ANPILLVEADTGRVIEQKEAGRPWHPASVTKLMTVYVALNAVRNGRLKFDT--PITVSPA 135
           AN  L+++  T  +I           ASVTKLMT  V L+A    +L  D   PIT+  A
Sbjct: 47  ANSALVIDLKTNEIIYSNNPDAVKPIASVTKLMTAIVTLDA----KLPMDAKLPITIKDA 102

Query: 136 AAAQQPSKMGFKVGTVVTLDNALKMVLVKSANDMAWLVGEGVAGSMPAFVAEMNATAAHL 195
              +       K+G+ ++  + L + L+ S N  A  +     G   AF+  MNA A  L
Sbjct: 103 KEMKGVHSR-VKIGSEISRKDMLLLTLMSSENRAAASLAHHYPGGYKAFIKAMNAKAKAL 161

Query: 196 GMTGTHFENPNGLPDPAQVTTARDLAILARAI--------IYHFPEQEALFRIPAIKIGK 247
           GM  T F  P GL     V+TARDL +L +A         +    ++   F  P   +  
Sbjct: 162 GMKNTRFVEPTGL-SAKNVSTARDLVVLLKASKKYPLLGKLSATDKKTVTFSKPRYTLD- 219

Query: 248 VVLRNYNRLI--DRYPGADGMKTGFVCGSGYNLVATATRGNKRLIAVILGARSGTARTEQ 305
              RN NRL+  D +   D  KTGF   +G+ LV     G +++  V+L  +   +    
Sbjct: 220 --FRNTNRLVHNDNWK-IDLTKTGFTNAAGHCLVMRTQMGRRQVAFVVLDTKGKLSPVGD 276

Query: 306 AALMFEKGFQSSWSVFGAAAPLLS 329
           A  +       +W   G   PL S
Sbjct: 277 ANRL------RTWIETGKVTPLSS 294