Pairwise Alignments

Query, 726 a.a., Polyribonucleotide nucleotidyltransferase from Xanthobacter sp. DMC5

Subject, 564 a.a., SSU ribosomal protein S1p from Pseudomonas fluorescens FW300-N2E2

 Score = 59.7 bits (143), Expect = 4e-13
 Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 6/86 (6%)

Query: 625 GQIYEGTVVKVVDFGAFVNFFGSKDGLVHVSQMANERVAKPSDVVKEGDKVKVKLMGFD- 683
           GQ  +G V  + D+GAFV+  G  DGL+H++ MA +R+  PS++V  GD++ VK++ +D 
Sbjct: 194 GQQVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRIKHPSEIVNVGDEIDVKVLKYDR 252

Query: 684 ERGKTRLSMKVVDQTTGEDLEAKAKA 709
           ER +  L +K +    GED     KA
Sbjct: 253 ERNRVSLGLKQL----GEDPWVAIKA 274



 Score = 46.6 bits (109), Expect = 3e-09
 Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 13/128 (10%)

Query: 590 INIEDDGTIKIASASGDSIKAAIN--------WIKSIASEPEVGQIYEGTVVKVVDFGAF 641
           +N+ D+  +K+     +  + ++         W+   A  PE  ++    V  + D+G F
Sbjct: 237 VNVGDEIDVKVLKYDRERNRVSLGLKQLGEDPWVAIKARYPESTRV-TARVTNLTDYGCF 295

Query: 642 VNFFGSKDGLVHVSQM--ANERVAKPSDVVKEGDKVKVKLMGFD-ERGKTRLSMKVVDQT 698
                  +GLVHVS+M   N+ +  PS VV+ GD+V+V ++  D ER +  L +K     
Sbjct: 296 AELEEGVEGLVHVSEMDWTNKNI-HPSKVVQVGDEVEVMVLDIDEERRRISLGIKQCKSN 354

Query: 699 TGEDLEAK 706
             ED   +
Sbjct: 355 PWEDFSGQ 362



 Score = 41.2 bits (95), Expect = 1e-07
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 625 GQIYEGTVVKVVDFGAFVNFFGSKDGLVHVSQMA-NERVAKPSDVVKEGDKVKVKLMGFD 683
           G    GT+  + DFG F+   G  DGLVH+S ++ NE   +     K+GD++   ++  D
Sbjct: 366 GDKISGTIKSITDFGIFIGLDGGIDGLVHLSDISWNEVGEEAVRRFKKGDELDTVILSVD 425

Query: 684 -ERGKTRLSMKVVD 696
            ER +  L +K ++
Sbjct: 426 PERERISLGIKQLE 439