Pairwise Alignments

Query, 350 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 346 a.a., Ammonia monooxygenase from Pseudomonas fluorescens FW300-N2E2

 Score = 82.0 bits (201), Expect = 2e-20
 Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 9/293 (3%)

Query: 14  GALGGLVFALLGLPAAWISGSLVACIGLALAG--MRIDVPEWLRFLAFVVLGTSMGTMLT 71
           G  GG + +L+G P  W+ GSL+A I +        +++P   +   +VV G  +G   T
Sbjct: 16  GLAGGYLASLIGWPLPWMVGSLLAIILVRCLTPWQLMEIPGGRKCGQWVV-GIGIGLHFT 74

Query: 72  PETFARAATWPVSMACLGASVLGTMAGGTLFLTRVAGWSRESAFWASAPGAFGTVVAMAA 131
           P    +  +    +   GA +    +  +++L R  G  R +AF++S PG  G +V + A
Sbjct: 75  PVVMEQVLSH-FGLIFFGALITSVSSVVSVWLMRRTGEERATAFFSSMPGGSGEMVNLGA 133

Query: 132 DTNADLRQVAFAQTLRLFLLVAALPNVLAALGMTAGGVPPPPHVSTLG--EIVVLFGVCT 189
              ADL +VA  Q+LR+ ++V  +P   AA     G   P  H +T+    + +LF    
Sbjct: 134 RNGADLSRVAAGQSLRVLVVVLCVP---AAFKYLLGEGSPVQHATTVDWLWLAILFPAGA 190

Query: 190 GAALLAARLKLPGGLILGALAGSAVLHATRLSTAVLPAELLIPAFVVLGGSVGVRFIGTS 249
             A +  RL+ P   + G L  SA +         LP         ++G  +G  F    
Sbjct: 191 LLAWVWERLRQPNPWLFGPLLVSAAVSVGWDLHIGLPNGASQVGQWLIGSGLGCHFNRQF 250

Query: 250 LSTIRAYVLASLGAFLVAVAISTLFALLAAWLTGDDLGKLVTAFAPGALEAMT 302
                +++  +L   ++ + I+TL AL  + LT  DL  L     PG +  M+
Sbjct: 251 FRRAPSFMGRTLIGTVLTMLIATLAALGLSTLTHLDLRSLTLGMMPGGIAEMS 303



 Score = 31.2 bits (69), Expect = 4e-05
 Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 7/105 (6%)

Query: 236 VLGGSVGVRFIGTSLSTIRAYVLASLGAFLVAVAISTLFALLAAWL---TGDDLGKLVTA 292
           V+G  +G+ F       +   VL+  G       I+++ ++++ WL   TG++      +
Sbjct: 64  VVGIGIGLHFT----PVVMEQVLSHFGLIFFGALITSVSSVVSVWLMRRTGEERATAFFS 119

Query: 293 FAPGALEAMTALGFAMGYDPAFMSAHHLFRFAGLSVALPVAARLM 337
             PG    M  LG   G D + ++A    R   + + +P A + +
Sbjct: 120 SMPGGSGEMVNLGARNGADLSRVAAGQSLRVLVVVLCVPAAFKYL 164