Pairwise Alignments

Query, 350 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 346 a.a., AbrB family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 90.5 bits (223), Expect = 6e-23
 Identities = 89/336 (26%), Positives = 153/336 (45%), Gaps = 47/336 (13%)

Query: 7   AAVTLGAGALGGLVFALLGLPAA--WISGSLVACIGLALAGMRIDVPEWLRFLAFVVLGT 64
           AAV  G G L       L +P +  +I+  LV  +      + I  P WL     VVLG 
Sbjct: 17  AAVAAGTGTL-------LSIPLSEMFIASGLVIVLHKK-RWLTIHTPPWLLLFVQVVLGI 68

Query: 65  SMGTMLTPETFARAATWPVSMA---CLGASVLGTMAGGTLFLTRVAGWSRESAFWASAPG 121
           S+G  ++        T PV +    CL   ++ +     L+LT+  GW+   +   + PG
Sbjct: 69  SVGATISLSELGTTLTLPVIVGLVCCLTLQIISSY----LWLTKKEGWTPFESLLGAVPG 124

Query: 122 AFGTVVAMAADTNADLRQVAFAQTLRLFLLVAALPNVLAALGMTAGGVPPPPHVSTLGEI 181
           A   ++ ++  +     +V ++ ++RL +L      +LA L   +     P   S  G +
Sbjct: 125 AMAAILVISESSEKPSAKVVYSHSVRLMILT-----LLALLISNSA----PDSASVDGSL 175

Query: 182 VV----LFGVCTGAALLAAR----LKLPGGLILGALAGSAVLHATRLSTAV-LPAELLIP 232
            V    +F      +LL  +    L +P   +L AL  +A  +       + LP  ++I 
Sbjct: 176 TVYAWLIFLALALMSLLLGKASTLLGIPAPYMLAALLITASFNGFATGIDMQLPKWMVIF 235

Query: 233 AFVVLGGSVGVRFIGTSLSTIRAY----VLASLGAFLVAVAISTLFALLA--AWLTGDDL 286
           A  +LG  +G R   T+L    AY    V+ ++   LVAV +S +F++L   +W+     
Sbjct: 236 ATALLGILIGSRIADTTLREAMAYSRAGVMVTMIGLLVAVGVSGVFSILIDKSWVV---- 291

Query: 287 GKLVTAFAPGALEAMTALGFAMGYDPAFMSAHHLFR 322
             L+ ++ PG++EAMTA+   +G +PAF+  +H  R
Sbjct: 292 --LLLSWVPGSVEAMTAVALLLGMEPAFVMINHALR 325