Pairwise Alignments

Query, 297 a.a., putative inner membrane transporter YedA from Xanthobacter sp. DMC5

Subject, 313 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 70.9 bits (172), Expect = 4e-17
 Identities = 72/301 (23%), Positives = 132/301 (43%), Gaps = 24/301 (7%)

Query: 2   AQTPRFGTELLLLLVLSTLWGASYTFIKVGVETIPPLTFIAARTLIAGSLLAAILRARGM 61
           AQ PR      L +VL  +W  +   I    ET+ P   + +R +IA  + + I+    +
Sbjct: 10  AQLPRLVPVSFLAVVL--IWSTTPLGIVWSSETVHPTMAVLSRMVIALIIGSLIILFSSI 67

Query: 62  RLPGDRASWARFLFQAGLNSVVPFTLIAWAEQTVDAGVATILNATSPIFAFLLTALATRH 121
           RLP  R ++  + + A +  V    L  +A + + +G  ++L   SP+ + LL       
Sbjct: 68  RLPWHRTAFKLYAYSA-IGIVGGMLLSYFAARYLASGTMSLLFGLSPLVSGLLAQRLLNE 126

Query: 122 EAVTARKLLGVPAGLAGTGFIVGFEALEGIGQQVWAQLAIVAATVCYAGAAIFGRSFKGL 181
              +  +++ +     G G +    A   +G   W  L ++   V     ++ G   K +
Sbjct: 127 PKFSPMRIMALILAFCGLGVVCS--AKLALGSDTWIGLVLILFAVFLF--SLSGVLIKTV 182

Query: 182 D----PMVPAAGSLLCG------AAVLLPVSIAVDRPWTLAPSARSLVALGLLSVFSTAL 231
           D    P+    G+LL        A ++   S+ VD  W    S RS+ A+  L +F + +
Sbjct: 183 DLAIHPIASTVGALLFSTPLFALAWLIFDASLPVDT-W----STRSIAAIFYLGIFGSLI 237

Query: 232 AFVIYFRLVRTLGSIGTTAQAYLRVPI-GVAIGVLCLGERLAPDAWIGLACVVAGVVAMT 290
            F+ YF +++ L +  T A   L  P+  +A+G +   E+++    IG   V+AG+    
Sbjct: 238 GFIGYFYILQHLNA-STVALVTLITPVFAMALGAMVNHEQISQTLMIGAGLVLAGLGLFQ 296

Query: 291 W 291
           W
Sbjct: 297 W 297