Pairwise Alignments

Query, 306 a.a., D-alanine--D-alanine ligase B from Xanthobacter sp. DMC5

Subject, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

 Score = 86.3 bits (212), Expect = 9e-22
 Identities = 98/330 (29%), Positives = 145/330 (43%), Gaps = 44/330 (13%)

Query: 5   VAVLMGGWSSEREVSLNSGAACAAALE-GAGYRVTPVDVGRD------------------ 45
           + +L GG SSE E+SL S       LE    + V  V++ ++                  
Sbjct: 6   ILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWFSEQGALVYLDTNSAT 65

Query: 46  VAEVLARLKPDVVFNVLHGAPGEDGTIQGILEILRIPYSHSGVLASALAMDKAQARIMLA 105
           +    A    D V   +HG PGE G IQ +LE+  IPY   G  ASA + +K  +++   
Sbjct: 66  LNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKITSKLWYD 125

Query: 106 AAGVP------VAKGGLVSRAAAAKAHAMERPYVLKPNTGGSSVGVF-IVREDQEHPPQE 158
           A  +P      + +    S   A +A        +K    GSSVG + +  EDQ  P  E
Sbjct: 126 ALDIPNTPYLFLTQNTPSSIDKAKQAFGHWGSIFVKAARQGSSVGCYKVTTEDQIAPAIE 185

Query: 159 LTREDWTLGENLLVEEFI--AGLELTCAVMGDKVF-----DVIEIESTQAFYDYESKY-A 210
                +   E +LVE+ +    LE++   M  K++     +VI  E T  FY YE KY A
Sbjct: 186 AA---FGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEGT--FYSYEEKYSA 240

Query: 211 PGGSRHILPARILPEIYQR-VQMLSLTAHRALGCRGVSRSDFRFDPSKGDASGLVCLEVN 269
              +R +L A  L E ++  +Q  +      +  R +SR DF F   +G    +   EVN
Sbjct: 241 NSHARTVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDF-FLTQEGQ---IYLNEVN 296

Query: 270 TQPGMTRTSLVPELAAHAGISFGELVTWMV 299
           T PGMT  S+ P++  H G  F E +   V
Sbjct: 297 TFPGMTPISMFPKMLEHNGHRFSEFLVQCV 326