Pairwise Alignments

Query, 306 a.a., D-alanine--D-alanine ligase B from Xanthobacter sp. DMC5

Subject, 336 a.a., D-alanine--D-alanine ligase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 71.6 bits (174), Expect = 2e-17
 Identities = 62/257 (24%), Positives = 118/257 (45%), Gaps = 19/257 (7%)

Query: 56  DVVFNVLHGAPGEDGTIQGILEILRIPYSHSGVLASALAMDKAQARIMLAAAGVP----V 111
           D V   +HG PGE G IQ    ++++PY      AS+   +K  A++  +A G+P    +
Sbjct: 79  DYVIPCIHGYPGETGDIQSYFNLIQLPYFGCESEASSNCFNKITAKMWFSALGIPNTPYI 138

Query: 112 AKGGLVSRAAAAKAHAMER--PYVLKPNTGGSSVGVFIVREDQEHPPQELTREDWTLGEN 169
                   A A    A+E+     +K  + GSSVG + V  D+      + ++ +     
Sbjct: 139 FLNQYDDEAIAQTQAALEKWGSIFVKAASQGSSVGCYKV--DEASKVLGVLKDAFGYAPY 196

Query: 170 LLVEEFIAGLELTCAV---MGDKVFDVIE--IESTQAFYDYESKYAPGGSRH--ILPARI 222
           ++VE+ I   EL  AV    G+ +  +    I  +  FY ++ KYA        ++   +
Sbjct: 197 VIVEKTIKARELEVAVYEYQGEVIATLPGEIICDSNTFYTFDEKYAKSSKARTDVVAQNV 256

Query: 223 LPEIYQRVQMLSLTAHRALGCRGVSRSDFRFDPSKGDASGLVCLEVNTQPGMTRTSLVPE 282
             +I  +++  ++ A + +  R +SR DF         + ++  E+NT PG T  S+ P+
Sbjct: 257 PTDISDQIRAYAIKAFKGMKLRHLSRIDFFLTAD----NEILLNEINTFPGSTPISMFPK 312

Query: 283 LAAHAGISFGELVTWMV 299
           +  + G  F + ++ ++
Sbjct: 313 MLQNHGHDFTQYLSLVI 329