Pairwise Alignments

Query, 344 a.a., Farnesyl diphosphate synthase from Xanthobacter sp. DMC5

Subject, 293 a.a., geranyltranstransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  228 bits (580), Expect = 2e-64
 Identities = 126/270 (46%), Positives = 165/270 (61%), Gaps = 7/270 (2%)

Query: 74  RLMGAMRHGALGGGKRLRPFLVIEGAALFGLTAEAAVTAATAIECVHCYSLVHDDLPAMD 133
           +L  AM HGAL GGKR+RPFLV     +FG+  E     A AIEC+H YSL+HDDLPAMD
Sbjct: 30  QLKAAMTHGALLGGKRIRPFLVYSVGQMFGVPLEKLDACAAAIECIHAYSLIHDDLPAMD 89

Query: 134 DDDLRRGRPTVHKAYDEATAILAGDGLLTLAFDLLAGEDAHPDPAVRIALVRALARAAGI 193
           DD LRRG+PTVH A+DEATAILAGD L TLAF+++            IA+VRALA+A+G 
Sbjct: 90  DDALRRGQPTVHIAFDEATAILAGDALQTLAFEIVTEAVPGITSEQHIAMVRALAKASGY 149

Query: 194 GGMVGGQMLDLAAEGRFSGGTPLAHGEDAIRDLQAMKTGALLAVSAEAGALLGGADAGQR 253
            GM GGQ +DLA+       T       A+  L  MKTGAL++ + E   +   A   Q 
Sbjct: 150 RGMCGGQAIDLAS-------TDKHIDLKALTQLHNMKTGALISCAVELALIAANAPKDQY 202

Query: 254 AALLAYGRALGAAFQIADDILDVEGTAEEVGKKVGKDAAAGKATLVSRLGLPEARLLLDR 313
             ++ +  A+G AFQ+ DDILD+  T EE+GK  G DA + K+T    LGL  A+    +
Sbjct: 203 QTMMEFAHAVGLAFQVQDDILDIIATTEELGKPQGSDAESNKSTFPQLLGLQGAKDTATQ 262

Query: 314 LVAEAADALAPFGARGEILAEAARFVAARR 343
           L+ EA  ALA      +++A+ AR++  RR
Sbjct: 263 LIQEALSALAKLPYNSQLIADFARYIIERR 292