Pairwise Alignments

Query, 388 a.a., Inner membrane transport permease YhhJ from Xanthobacter sp. DMC5

Subject, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score = 74.7 bits (182), Expect = 3e-18
 Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 18/215 (8%)

Query: 151 SAIFQTEVNRFVLRHSEGVASPVNLQI---------RAAFNQGLESSWFTGT-------M 194
           SA+F  ++ RF    S  + S +N  +           AF+       F G         
Sbjct: 5   SAMFYRQLRRFTRAKSRVIGSLLNPLVWLVFFGIGWSRAFDFPAAREIFGGVDYLTYLIP 64

Query: 195 GLITNITMLSVLLAGAALIREREHGTLEHLLVLPVRPSEIMLAKVVANGAVILVATLVSL 254
           G+++        ++G  +I +++ G L+  LV P   SE +L +++ +    L+  ++ +
Sbjct: 65  GVVSMTVFSGSFISGVTVIWDKQFGFLKETLVAPTSRSEAILGRIMGDSITALIQGVLIM 124

Query: 255 VAVLKWVLGVSIAGSIPLFLAGAALYLFFTASLGIFLGTLAGSMPQFGLLFFLVVLPMNM 314
           V  L +++ ++  G IP+      L + F AS+GI LG    S   F L+F L++ P+  
Sbjct: 125 VLSL-FLVSLNPFGMIPVIFTSFILAVAF-ASVGISLGLKINSQEGFHLIFGLLMQPLIF 182

Query: 315 LSGGFTPLESMPQWLQVTMQASPSTQFVAFAQAIL 349
           LSG F P+++MP W+++    +P T  V  A+  L
Sbjct: 183 LSGAFYPIDAMPTWMKILAYINPLTYAVDSARYFL 217